Top 10 genes with highest correlation to Rv2775/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1498c/- | (cc=0.6072) | info on Rv1498c/- |
| Rv2452c/- | (cc=0.5921) | info on Rv2452c/- |
| Rv2957/- | (cc=0.5567) | info on Rv2957/- |
| Rv1500/- | (cc=0.549) | info on Rv1500/- |
| Rv1583c/- | (cc=0.5471) | info on Rv1583c/- |
| Rv2267c/- | (cc=0.5409) | info on Rv2267c/- |
| Rv2881c/cdsA | (cc=0.5309) | info on Rv2881c/cdsA |
| Rv3628/ppa | (cc=0.5264) | info on Rv3628/ppa |
| Rv3429/PPE59 | (cc=0.524) | info on Rv3429/PPE59 |
| Rv1116/- | (cc=0.5156) | info on Rv1116/- |
Correlation of Rv2775/- with Rv1116/-
Normalized LFCs for Rv2775/-:
(description and provenance of datasets)
| Rv2775/- | Rv1116/- | |
| Fe_supp_jason_reseq | 0.466 | -0.079 |
| low_pH_jason_reseq | -0.037 | 1.563 |
| NO_jason_reseq | -0.977 | -0.937 |
| B6_jason_reseq | 0.469 | -0.775 |
| MHCII_jason_reseq | -0.364 | -2.185 |
| Isoniazid02 | -0.389 | -0.202 |
| Rifampicin4 | -0.038 | -0.793 |
| Ethambutol3 | -0.276 | -0.469 |
| Meropenem3 | -1.548 | -0.329 |
| Vancomycin16 | -0.127 | -0.544 |
| Rv2680_day32 | -0.205 | -3.002 |
| H37Rv_KO_MarP | -0.666 | 0.209 |
| hypoxia_3wks | -0.817 | 0.881 |
| hypoxia_6wks | 0.058 | 0.315 |
| glycerol | -1.814 | -2.319 |
| cholesterol | -1.544 | -1.265 |
| AJ | 0.474 | -0.866 |
| Bibs02 | -1.113 | -0.507 |
| Bibs02c | -0.1 | 1.479 |
| BL6 | 0.246 | 1.089 |
| BL6a | 0.595 | 3.068 |
| BXD01 | 0.083 | 1.975 |
| BXD010 | 1.009 | 3.315 |
| BXD011 | 0.952 | 2.491 |
| BXD03 | 0.569 | 2.737 |
| BXD04 | 0.432 | 2.569 |
| BXD05 | 2.161 | 2.73 |
| BXD06 | 1.25 | 2.452 |
| BXD07 | 0.675 | 2.972 |
| BXD08 | 0.499 | 2.685 |
| BXD09 | 0.951 | 2.084 |
| CAST | 0.592 | -0.859 |
| CCcont | 0.59 | 1.588 |
| DS01 | 0.994 | -0.352 |
| DS02 | -0.378 | -2.497 |
| DS04 | 0.037 | -1.405 |
| DS0c | -0.192 | -1.425 |
| GP01 | 1.913 | 2.097 |
| GP02 | 0.55 | -0.353 |
| GP0c | 1.296 | 2.178 |
| NOD | 1.394 | -0.623 |
| NZO | 0.162 | -2.29 |
| PWK | 1.047 | -1.563 |
| H37Rv_KO_CtpC | 0.599 | 3.593 |
| H37Rv_KO_CtpD | 1.142 | 1.121 |
| H37Rv_KO_Rv1272 | 1.787 | 1.482 |
| H37Rv_KO_SugABC | 1.287 | -0.321 |
| H37Rv_KO_MbtN | 0.538 | 1.349 |
| Trans05 | 1.467 | 1.761 |
| macrophage_unactivated | 0.524 | -1.727 |
| IL1 | -0.35 | -1.216 |
| Rapamycin | 0.964 | -0.414 |
| Tcell | -0.775 | -1.606 |
| GMCSF | 0.525 | -0.38 |
| IFNab | 0.747 | -0.46 |
| IFNg | 0.083 | -1.646 |
| IFNg_GMCSF1 | 0.019 | -0.723 |
| Rv1432_day32 | 0.113 | 0.0 |
| Rv1565c_day32 | 0.199 | -0.622 |
| secA2_input | 0.172 | 0.092 |
| delta_Rv3594 | -0.812 | -2.284 |
| delta_Rv3717 | -1.117 | -0.364 |
| delta_Rv3811 | -1.056 | 0.213 |
| delta_Rv0954 | -1.181 | -1.87 |
| PonA1 | -2.209 | -3.333 |
| EccD1_KO | 0.506 | 0.51 |
| EspI_KO | 1.269 | 1.934 |
| PE35_KO | 1.502 | 0.796 |
| PPE68_KO | 1.574 | 1.523 |
| glycerol2 | 0.0 | -1.516 |
| lignocerate | 0.935 | -1.445 |
| oleate | -1.208 | -0.045 |
| phosphatidylcholine | 0.629 | -0.403 |
| acetate | 0.469 | -1.837 |
| glucAc | 0.563 | -2.853 |
| Rv0950ko | 0.389 | 1.263 |
| Rv1096ko | 0.178 | 0.989 |
| Rv3684ko | -0.098 | 0.095 |
| delta_otsA_trehalose | -0.085 | 0.483 |