Top 10 genes with highest correlation to Rv2774c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2570/- | (cc=0.5434) | info on Rv2570/- |
| Rv2806/- | (cc=0.4999) | info on Rv2806/- |
| Rv3178/- | (cc=0.4979) | info on Rv3178/- |
| Rv0403c/mmpS1 | (cc=0.4759) | info on Rv0403c/mmpS1 |
| Rv2530c/vapC39 | (cc=0.4648) | info on Rv2530c/vapC39 |
| Rv2884/- | (cc=0.4581) | info on Rv2884/- |
| Rv1949c/- | (cc=0.4545) | info on Rv1949c/- |
| Rv2435c/- | (cc=0.4524) | info on Rv2435c/- |
| Rv3702c/- | (cc=0.4515) | info on Rv3702c/- |
| Rv3110/moaB1 | (cc=0.4479) | info on Rv3110/moaB1 |
Correlation of Rv2774c/- with Rv2884/-
Normalized LFCs for Rv2774c/-:
(description and provenance of datasets)
| Rv2774c/- | Rv2884/- | |
| Fe_supp_jason_reseq | 0.766 | -0.466 |
| low_pH_jason_reseq | 0.303 | 0.294 |
| NO_jason_reseq | -0.459 | -1.483 |
| B6_jason_reseq | -0.978 | 0.101 |
| MHCII_jason_reseq | -1.194 | 0.356 |
| Isoniazid02 | -0.506 | 0.796 |
| Rifampicin4 | -0.328 | -0.717 |
| Ethambutol3 | -0.198 | 0.393 |
| Meropenem3 | -0.231 | -0.113 |
| Vancomycin16 | -0.138 | -0.515 |
| Rv2680_day32 | -0.854 | -0.151 |
| H37Rv_KO_MarP | -0.5 | -0.666 |
| hypoxia_3wks | 1.168 | -0.319 |
| hypoxia_6wks | 0.05 | -0.094 |
| glycerol | -1.565 | 0.057 |
| cholesterol | 0.187 | -0.684 |
| AJ | 0.324 | -0.682 |
| Bibs02 | -0.216 | 0.229 |
| Bibs02c | -1.734 | 0.209 |
| BL6 | -0.97 | -0.859 |
| BL6a | 0.049 | 0.346 |
| BXD01 | 0.379 | 0.248 |
| BXD010 | -0.17 | -0.531 |
| BXD011 | 0.54 | 0.359 |
| BXD03 | 1.146 | 0.672 |
| BXD04 | -1.169 | -0.274 |
| BXD05 | 0.787 | -0.191 |
| BXD06 | -0.122 | -0.265 |
| BXD07 | 1.07 | -0.407 |
| BXD08 | -0.214 | 0.555 |
| BXD09 | -0.676 | 0.375 |
| CAST | 0.028 | 0.169 |
| CCcont | -1.082 | -0.043 |
| DS01 | 0.666 | 0.067 |
| DS02 | 1.177 | 0.414 |
| DS04 | -0.202 | -0.523 |
| DS0c | -1.131 | 0.0 |
| GP01 | 1.716 | 1.34 |
| GP02 | 1.025 | 0.693 |
| GP0c | 1.947 | 0.639 |
| NOD | -0.638 | 0.532 |
| NZO | 0.708 | -0.178 |
| PWK | -0.024 | 0.279 |
| H37Rv_KO_CtpC | 0.904 | -0.015 |
| H37Rv_KO_CtpD | 0.308 | -1.213 |
| H37Rv_KO_Rv1272 | 1.625 | 2.348 |
| H37Rv_KO_SugABC | -0.401 | 0.107 |
| H37Rv_KO_MbtN | 1.233 | 1.712 |
| Trans05 | 1.885 | 1.374 |
| macrophage_unactivated | -0.843 | -0.363 |
| IL1 | 0.623 | 0.0 |
| Rapamycin | -1.436 | -0.353 |
| Tcell | 0.329 | 0.567 |
| GMCSF | -1.708 | 0.657 |
| IFNab | 2.279 | 0.254 |
| IFNg | -2.111 | -0.885 |
| IFNg_GMCSF1 | 0.264 | -0.157 |
| Rv1432_day32 | -0.554 | -0.222 |
| Rv1565c_day32 | -1.538 | -0.828 |
| secA2_input | -0.991 | -0.538 |
| delta_Rv3594 | 1.144 | 0.089 |
| delta_Rv3717 | 0.624 | -0.24 |
| delta_Rv3811 | 0.697 | -0.516 |
| delta_Rv0954 | 1.485 | -0.262 |
| PonA1 | 0.913 | -0.538 |
| EccD1_KO | 0.378 | 0.342 |
| EspI_KO | 0.938 | 0.684 |
| PE35_KO | 0.79 | 1.333 |
| PPE68_KO | 1.405 | 1.872 |
| glycerol2 | 0.171 | 0.077 |
| lignocerate | -1.198 | -0.267 |
| oleate | 0.379 | 0.391 |
| phosphatidylcholine | -0.15 | 0.464 |
| acetate | -2.095 | -0.364 |
| glucAc | -3.37 | -0.944 |
| Rv0950ko | 0.202 | -0.422 |
| Rv1096ko | -0.856 | -0.685 |
| Rv3684ko | 0.147 | -0.033 |
| delta_otsA_trehalose | -0.536 | -0.427 |