Top 10 genes with highest correlation to Rv2774c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2570/- | (cc=0.5434) | info on Rv2570/- |
| Rv2806/- | (cc=0.4999) | info on Rv2806/- |
| Rv3178/- | (cc=0.4979) | info on Rv3178/- |
| Rv0403c/mmpS1 | (cc=0.4759) | info on Rv0403c/mmpS1 |
| Rv2530c/vapC39 | (cc=0.4648) | info on Rv2530c/vapC39 |
| Rv2884/- | (cc=0.4581) | info on Rv2884/- |
| Rv1949c/- | (cc=0.4545) | info on Rv1949c/- |
| Rv2435c/- | (cc=0.4524) | info on Rv2435c/- |
| Rv3702c/- | (cc=0.4515) | info on Rv3702c/- |
| Rv3110/moaB1 | (cc=0.4479) | info on Rv3110/moaB1 |
Correlation of Rv2774c/- with Rv2530c/vapC39
Normalized LFCs for Rv2774c/-:
(description and provenance of datasets)
| Rv2774c/- | Rv2530c/vapC39 | |
| Fe_supp_jason_reseq | 0.766 | 2.021 |
| low_pH_jason_reseq | 0.303 | 1.586 |
| NO_jason_reseq | -0.459 | -0.281 |
| B6_jason_reseq | -0.978 | -0.538 |
| MHCII_jason_reseq | -1.194 | -0.217 |
| Isoniazid02 | -0.506 | 0.546 |
| Rifampicin4 | -0.328 | 0.474 |
| Ethambutol3 | -0.198 | -0.089 |
| Meropenem3 | -0.231 | -0.053 |
| Vancomycin16 | -0.138 | 1.305 |
| Rv2680_day32 | -0.854 | 1.701 |
| H37Rv_KO_MarP | -0.5 | -0.165 |
| hypoxia_3wks | 1.168 | 0.187 |
| hypoxia_6wks | 0.05 | -0.228 |
| glycerol | -1.565 | 1.463 |
| cholesterol | 0.187 | 0.0 |
| AJ | 0.324 | 0.0 |
| Bibs02 | -0.216 | 0.0 |
| Bibs02c | -1.734 | 0.0 |
| BL6 | -0.97 | 0.0 |
| BL6a | 0.049 | 3.566 |
| BXD01 | 0.379 | 3.731 |
| BXD010 | -0.17 | 3.969 |
| BXD011 | 0.54 | 2.955 |
| BXD03 | 1.146 | 1.849 |
| BXD04 | -1.169 | 2.75 |
| BXD05 | 0.787 | 3.385 |
| BXD06 | -0.122 | 3.49 |
| BXD07 | 1.07 | 3.809 |
| BXD08 | -0.214 | 2.491 |
| BXD09 | -0.676 | 3.016 |
| CAST | 0.028 | 0.23 |
| CCcont | -1.082 | 0.285 |
| DS01 | 0.666 | 0.0 |
| DS02 | 1.177 | 0.0 |
| DS04 | -0.202 | 0.533 |
| DS0c | -1.131 | 0.0 |
| GP01 | 1.716 | 1.43 |
| GP02 | 1.025 | 2.139 |
| GP0c | 1.947 | 3.221 |
| NOD | -0.638 | 0.225 |
| NZO | 0.708 | 0.0 |
| PWK | -0.024 | 0.0 |
| H37Rv_KO_CtpC | 0.904 | 4.288 |
| H37Rv_KO_CtpD | 0.308 | 5.372 |
| H37Rv_KO_Rv1272 | 1.625 | 0.495 |
| H37Rv_KO_SugABC | -0.401 | 0.272 |
| H37Rv_KO_MbtN | 1.233 | 0.437 |
| Trans05 | 1.885 | 4.469 |
| macrophage_unactivated | -0.843 | 2.5 |
| IL1 | 0.623 | 0.492 |
| Rapamycin | -1.436 | 0.411 |
| Tcell | 0.329 | 2.9 |
| GMCSF | -1.708 | -1.735 |
| IFNab | 2.279 | 1.587 |
| IFNg | -2.111 | -0.294 |
| IFNg_GMCSF1 | 0.264 | 3.086 |
| Rv1432_day32 | -0.554 | 0.0 |
| Rv1565c_day32 | -1.538 | 0.218 |
| secA2_input | -0.991 | 0.294 |
| delta_Rv3594 | 1.144 | 1.667 |
| delta_Rv3717 | 0.624 | 0.635 |
| delta_Rv3811 | 0.697 | 2.214 |
| delta_Rv0954 | 1.485 | 1.858 |
| PonA1 | 0.913 | 3.233 |
| EccD1_KO | 0.378 | -2.684 |
| EspI_KO | 0.938 | 1.241 |
| PE35_KO | 0.79 | 0.823 |
| PPE68_KO | 1.405 | -0.106 |
| glycerol2 | 0.171 | -0.42 |
| lignocerate | -1.198 | -1.112 |
| oleate | 0.379 | 1.036 |
| phosphatidylcholine | -0.15 | 0.366 |
| acetate | -2.095 | -1.44 |
| glucAc | -3.37 | -3.978 |
| Rv0950ko | 0.202 | 0.691 |
| Rv1096ko | -0.856 | 0.513 |
| Rv3684ko | 0.147 | -0.305 |
| delta_otsA_trehalose | -0.536 | -0.503 |