Top 10 genes with highest correlation to Rv2774c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2570/- | (cc=0.5434) | info on Rv2570/- |
| Rv2806/- | (cc=0.4999) | info on Rv2806/- |
| Rv3178/- | (cc=0.4979) | info on Rv3178/- |
| Rv0403c/mmpS1 | (cc=0.4759) | info on Rv0403c/mmpS1 |
| Rv2530c/vapC39 | (cc=0.4648) | info on Rv2530c/vapC39 |
| Rv2884/- | (cc=0.4581) | info on Rv2884/- |
| Rv1949c/- | (cc=0.4545) | info on Rv1949c/- |
| Rv2435c/- | (cc=0.4524) | info on Rv2435c/- |
| Rv3702c/- | (cc=0.4515) | info on Rv3702c/- |
| Rv3110/moaB1 | (cc=0.4479) | info on Rv3110/moaB1 |
Correlation of Rv2774c/- with Rv2806/-
Normalized LFCs for Rv2774c/-:
(description and provenance of datasets)
| Rv2774c/- | Rv2806/- | |
| Fe_supp_jason_reseq | 0.766 | -0.54 |
| low_pH_jason_reseq | 0.303 | -1.087 |
| NO_jason_reseq | -0.459 | -0.992 |
| B6_jason_reseq | -0.978 | -0.321 |
| MHCII_jason_reseq | -1.194 | 0.315 |
| Isoniazid02 | -0.506 | -0.589 |
| Rifampicin4 | -0.328 | -0.495 |
| Ethambutol3 | -0.198 | -0.754 |
| Meropenem3 | -0.231 | -0.621 |
| Vancomycin16 | -0.138 | -0.045 |
| Rv2680_day32 | -0.854 | -0.554 |
| H37Rv_KO_MarP | -0.5 | 0.023 |
| hypoxia_3wks | 1.168 | 1.196 |
| hypoxia_6wks | 0.05 | 1.063 |
| glycerol | -1.565 | 0.513 |
| cholesterol | 0.187 | -1.016 |
| AJ | 0.324 | 1.407 |
| Bibs02 | -0.216 | 0.343 |
| Bibs02c | -1.734 | -0.808 |
| BL6 | -0.97 | -0.483 |
| BL6a | 0.049 | -0.036 |
| BXD01 | 0.379 | 1.022 |
| BXD010 | -0.17 | 0.486 |
| BXD011 | 0.54 | 0.584 |
| BXD03 | 1.146 | 0.325 |
| BXD04 | -1.169 | 0.308 |
| BXD05 | 0.787 | 0.544 |
| BXD06 | -0.122 | 0.394 |
| BXD07 | 1.07 | 1.055 |
| BXD08 | -0.214 | 0.866 |
| BXD09 | -0.676 | 0.482 |
| CAST | 0.028 | 0.093 |
| CCcont | -1.082 | -0.766 |
| DS01 | 0.666 | 0.135 |
| DS02 | 1.177 | 0.947 |
| DS04 | -0.202 | 0.354 |
| DS0c | -1.131 | 0.418 |
| GP01 | 1.716 | 0.576 |
| GP02 | 1.025 | 0.207 |
| GP0c | 1.947 | -0.269 |
| NOD | -0.638 | -0.449 |
| NZO | 0.708 | 1.428 |
| PWK | -0.024 | 1.144 |
| H37Rv_KO_CtpC | 0.904 | 0.84 |
| H37Rv_KO_CtpD | 0.308 | -1.44 |
| H37Rv_KO_Rv1272 | 1.625 | 1.179 |
| H37Rv_KO_SugABC | -0.401 | 0.568 |
| H37Rv_KO_MbtN | 1.233 | 1.216 |
| Trans05 | 1.885 | 1.05 |
| macrophage_unactivated | -0.843 | 0.237 |
| IL1 | 0.623 | -0.208 |
| Rapamycin | -1.436 | 0.307 |
| Tcell | 0.329 | 0.701 |
| GMCSF | -1.708 | -0.586 |
| IFNab | 2.279 | -0.435 |
| IFNg | -2.111 | -0.094 |
| IFNg_GMCSF1 | 0.264 | -0.163 |
| Rv1432_day32 | -0.554 | 0.733 |
| Rv1565c_day32 | -1.538 | -0.539 |
| secA2_input | -0.991 | -0.218 |
| delta_Rv3594 | 1.144 | 2.226 |
| delta_Rv3717 | 0.624 | 1.441 |
| delta_Rv3811 | 0.697 | 2.28 |
| delta_Rv0954 | 1.485 | 1.567 |
| PonA1 | 0.913 | 0.925 |
| EccD1_KO | 0.378 | 0.0 |
| EspI_KO | 0.938 | -0.026 |
| PE35_KO | 0.79 | 0.42 |
| PPE68_KO | 1.405 | 0.637 |
| glycerol2 | 0.171 | 0.205 |
| lignocerate | -1.198 | -0.393 |
| oleate | 0.379 | 1.009 |
| phosphatidylcholine | -0.15 | 0.356 |
| acetate | -2.095 | -0.735 |
| glucAc | -3.37 | -1.598 |
| Rv0950ko | 0.202 | 0.516 |
| Rv1096ko | -0.856 | -0.187 |
| Rv3684ko | 0.147 | 0.265 |
| delta_otsA_trehalose | -0.536 | -0.492 |