Top 10 genes with highest correlation to Rv2750/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0551c/fadD8 | (cc=0.5844) | info on Rv0551c/fadD8 |
| Rv2642/- | (cc=0.4974) | info on Rv2642/- |
| Rv0724A/- | (cc=0.4849) | info on Rv0724A/- |
| Rv3839/- | (cc=0.4819) | info on Rv3839/- |
| Rv1894c/- | (cc=0.478) | info on Rv1894c/- |
| Rv1989c/- | (cc=0.4738) | info on Rv1989c/- |
| Rv3577/- | (cc=0.4674) | info on Rv3577/- |
| Rv2095c/pafC | (cc=0.4643) | info on Rv2095c/pafC |
| Rv3294c/- | (cc=0.4543) | info on Rv3294c/- |
| Rv1734c/- | (cc=0.4536) | info on Rv1734c/- |
Correlation of Rv2750/- with Rv1989c/-
Normalized LFCs for Rv2750/-:
(description and provenance of datasets)
| Rv2750/- | Rv1989c/- | |
| Fe_supp_jason_reseq | -1.361 | -0.633 |
| low_pH_jason_reseq | -1.087 | -0.243 |
| NO_jason_reseq | 0.446 | 0.446 |
| B6_jason_reseq | 0.623 | 0.514 |
| MHCII_jason_reseq | 0.342 | 0.217 |
| Isoniazid02 | -0.055 | 0.499 |
| Rifampicin4 | -1.795 | -0.915 |
| Ethambutol3 | -0.415 | 0.931 |
| Meropenem3 | 0.023 | -0.738 |
| Vancomycin16 | -0.841 | -0.26 |
| Rv2680_day32 | -1.013 | 0.615 |
| H37Rv_KO_MarP | -0.433 | 0.049 |
| hypoxia_3wks | -0.467 | -0.187 |
| hypoxia_6wks | 0.28 | -0.221 |
| glycerol | -0.05 | -1.791 |
| cholesterol | 0.133 | -0.893 |
| AJ | 1.336 | -0.034 |
| Bibs02 | 0.168 | 0.442 |
| Bibs02c | -0.476 | 0.138 |
| BL6 | -1.684 | -1.171 |
| BL6a | -0.098 | -0.36 |
| BXD01 | 0.392 | -0.451 |
| BXD010 | -0.411 | -1.432 |
| BXD011 | 0.089 | -0.947 |
| BXD03 | -1.287 | -0.586 |
| BXD04 | -0.158 | -0.24 |
| BXD05 | -0.172 | -0.529 |
| BXD06 | -0.566 | -1.085 |
| BXD07 | 0.258 | -0.764 |
| BXD08 | 0.275 | -0.912 |
| BXD09 | -0.451 | -0.975 |
| CAST | -0.202 | -0.087 |
| CCcont | -1.826 | -1.18 |
| DS01 | -1.223 | -0.05 |
| DS02 | 0.693 | 0.314 |
| DS04 | 0.302 | 0.008 |
| DS0c | 0.858 | -0.041 |
| GP01 | -0.401 | 0.022 |
| GP02 | -0.633 | 1.252 |
| GP0c | -0.99 | -0.335 |
| NOD | 1.232 | 0.221 |
| NZO | 0.371 | -0.452 |
| PWK | 1.312 | -0.121 |
| H37Rv_KO_CtpC | 0.518 | -0.824 |
| H37Rv_KO_CtpD | -1.705 | -0.613 |
| H37Rv_KO_Rv1272 | 0.732 | 0.126 |
| H37Rv_KO_SugABC | 0.069 | -0.039 |
| H37Rv_KO_MbtN | -1.433 | 0.025 |
| Trans05 | 0.815 | 0.533 |
| macrophage_unactivated | -1.31 | -0.546 |
| IL1 | -1.427 | -1.056 |
| Rapamycin | -1.175 | -1.114 |
| Tcell | 0.078 | -0.564 |
| GMCSF | -2.516 | -0.826 |
| IFNab | -0.381 | -0.602 |
| IFNg | -0.337 | 0.219 |
| IFNg_GMCSF1 | 0.292 | 0.053 |
| Rv1432_day32 | 0.0 | 0.493 |
| Rv1565c_day32 | 0.286 | 0.548 |
| secA2_input | 0.834 | -0.888 |
| delta_Rv3594 | 1.117 | 0.85 |
| delta_Rv3717 | 0.893 | 0.337 |
| delta_Rv3811 | 1.511 | 0.573 |
| delta_Rv0954 | -0.981 | 0.417 |
| PonA1 | 0.278 | 0.083 |
| EccD1_KO | -0.079 | 0.661 |
| EspI_KO | -0.918 | -0.114 |
| PE35_KO | 0.07 | 0.248 |
| PPE68_KO | -0.403 | -0.128 |
| glycerol2 | -1.048 | 0.083 |
| lignocerate | -0.911 | 0.153 |
| oleate | 0.176 | 0.349 |
| phosphatidylcholine | 0.067 | 0.218 |
| acetate | -0.886 | -0.472 |
| glucAc | -1.309 | -0.616 |
| Rv0950ko | 1.022 | 0.28 |
| Rv1096ko | 0.651 | 0.057 |
| Rv3684ko | 0.203 | -0.377 |
| delta_otsA_trehalose | 3.743 | 1.837 |