Top 10 genes with highest correlation to Rv2750/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0551c/fadD8 | (cc=0.5844) | info on Rv0551c/fadD8 |
| Rv2642/- | (cc=0.4974) | info on Rv2642/- |
| Rv0724A/- | (cc=0.4849) | info on Rv0724A/- |
| Rv3839/- | (cc=0.4819) | info on Rv3839/- |
| Rv1894c/- | (cc=0.478) | info on Rv1894c/- |
| Rv1989c/- | (cc=0.4738) | info on Rv1989c/- |
| Rv3577/- | (cc=0.4674) | info on Rv3577/- |
| Rv2095c/pafC | (cc=0.4643) | info on Rv2095c/pafC |
| Rv3294c/- | (cc=0.4543) | info on Rv3294c/- |
| Rv1734c/- | (cc=0.4536) | info on Rv1734c/- |
Correlation of Rv2750/- with Rv0724A/-
Normalized LFCs for Rv2750/-:
(description and provenance of datasets)
| Rv2750/- | Rv0724A/- | |
| Fe_supp_jason_reseq | -1.361 | -1.474 |
| low_pH_jason_reseq | -1.087 | -2.195 |
| NO_jason_reseq | 0.446 | -1.549 |
| B6_jason_reseq | 0.623 | -1.015 |
| MHCII_jason_reseq | 0.342 | 0.724 |
| Isoniazid02 | -0.055 | -0.495 |
| Rifampicin4 | -1.795 | -1.362 |
| Ethambutol3 | -0.415 | -0.81 |
| Meropenem3 | 0.023 | -1.499 |
| Vancomycin16 | -0.841 | -0.703 |
| Rv2680_day32 | -1.013 | 0.614 |
| H37Rv_KO_MarP | -0.433 | -0.406 |
| hypoxia_3wks | -0.467 | -0.981 |
| hypoxia_6wks | 0.28 | -1.403 |
| glycerol | -0.05 | 0.519 |
| cholesterol | 0.133 | -1.029 |
| AJ | 1.336 | 0.898 |
| Bibs02 | 0.168 | 0.244 |
| Bibs02c | -0.476 | 0.111 |
| BL6 | -1.684 | -3.575 |
| BL6a | -0.098 | -1.112 |
| BXD01 | 0.392 | -0.825 |
| BXD010 | -0.411 | -2.545 |
| BXD011 | 0.089 | -1.552 |
| BXD03 | -1.287 | -0.961 |
| BXD04 | -0.158 | -0.638 |
| BXD05 | -0.172 | -1.374 |
| BXD06 | -0.566 | -1.514 |
| BXD07 | 0.258 | -1.022 |
| BXD08 | 0.275 | -1.221 |
| BXD09 | -0.451 | -1.807 |
| CAST | -0.202 | 0.531 |
| CCcont | -1.826 | -4.268 |
| DS01 | -1.223 | 0.094 |
| DS02 | 0.693 | -0.936 |
| DS04 | 0.302 | -0.835 |
| DS0c | 0.858 | -0.473 |
| GP01 | -0.401 | -2.822 |
| GP02 | -0.633 | -1.581 |
| GP0c | -0.99 | -2.584 |
| NOD | 1.232 | 0.015 |
| NZO | 0.371 | 0.597 |
| PWK | 1.312 | -0.24 |
| H37Rv_KO_CtpC | 0.518 | -0.079 |
| H37Rv_KO_CtpD | -1.705 | 1.128 |
| H37Rv_KO_Rv1272 | 0.732 | 0.333 |
| H37Rv_KO_SugABC | 0.069 | -1.764 |
| H37Rv_KO_MbtN | -1.433 | -2.048 |
| Trans05 | 0.815 | -0.111 |
| macrophage_unactivated | -1.31 | -1.335 |
| IL1 | -1.427 | -0.074 |
| Rapamycin | -1.175 | -1.611 |
| Tcell | 0.078 | -1.486 |
| GMCSF | -2.516 | -0.481 |
| IFNab | -0.381 | -2.035 |
| IFNg | -0.337 | -1.697 |
| IFNg_GMCSF1 | 0.292 | 0.368 |
| Rv1432_day32 | 0.0 | 1.902 |
| Rv1565c_day32 | 0.286 | -1.579 |
| secA2_input | 0.834 | -0.268 |
| delta_Rv3594 | 1.117 | 0.434 |
| delta_Rv3717 | 0.893 | 0.71 |
| delta_Rv3811 | 1.511 | -0.344 |
| delta_Rv0954 | -0.981 | -0.395 |
| PonA1 | 0.278 | -0.233 |
| EccD1_KO | -0.079 | 0.046 |
| EspI_KO | -0.918 | -0.385 |
| PE35_KO | 0.07 | 0.473 |
| PPE68_KO | -0.403 | -0.282 |
| glycerol2 | -1.048 | -0.249 |
| lignocerate | -0.911 | -1.405 |
| oleate | 0.176 | 0.086 |
| phosphatidylcholine | 0.067 | -0.183 |
| acetate | -0.886 | -1.19 |
| glucAc | -1.309 | -2.881 |
| Rv0950ko | 1.022 | 0.793 |
| Rv1096ko | 0.651 | -0.283 |
| Rv3684ko | 0.203 | -0.93 |
| delta_otsA_trehalose | 3.743 | 2.105 |