TnSeqCorr

Top 10 genes with highest correlation to Rv2748c/ftsK:

update plotcorrelationlink to info on gene
Rv0116c/ldtA (cc=0.5142) info on Rv0116c/ldtA
Rv3707c/- (cc=0.5139) info on Rv3707c/-
Rv0530/- (cc=0.4922) info on Rv0530/-
Rv3522/ltp4 (cc=0.4866) info on Rv3522/ltp4
Rv1460/- (cc=0.4509) info on Rv1460/-
Rv1442/bisC (cc=0.4342) info on Rv1442/bisC
Rv3506/fadD17 (cc=0.4309) info on Rv3506/fadD17
Rv0442c/PPE10 (cc=0.4272) info on Rv0442c/PPE10
Rv0103c/ctpB (cc=0.4234) info on Rv0103c/ctpB
Rv0906/- (cc=0.4036) info on Rv0906/-

Correlation of Rv2748c/ftsK with Rv0906/-

Normalized LFCs for Rv2748c/ftsK:
(description and provenance of datasets)
Rv2748c/ftsKRv0906/-
Fe_supp_jason_reseq

0.878

-0.122

low_pH_jason_reseq

-0.303

-0.447

NO_jason_reseq

-1.016

0.05

B6_jason_reseq

0.74

0.776

MHCII_jason_reseq

1.731

1.057

Isoniazid02

0.097

-3.102

Rifampicin4

-0.19

0.433

Ethambutol3

0.159

-2.783

Meropenem3

0.157

-1.412

Vancomycin16

1.101

-0.836

Rv2680_day32

-1.231

-1.398

H37Rv_KO_MarP

0.0

0.48

hypoxia_3wks

-0.502

-0.371

hypoxia_6wks

-0.263

0.027

glycerol

0.0

-0.176

cholesterol

0.149

-0.171

AJ

-0.173

-0.185

Bibs02

0.065

0.261

Bibs02c

-0.506

0.54

BL6

0.129

-0.728

BL6a

0.07

-0.641

BXD01

0.794

-0.511

BXD010

-0.975

-0.584

BXD011

-0.308

-0.308

BXD03

0.182

-0.753

BXD04

-0.357

-0.146

BXD05

-0.389

-0.734

BXD06

-0.049

-0.552

BXD07

0.9

-0.573

BXD08

-0.322

0.01

BXD09

-0.278

-0.999

CAST

0.0

-0.272

CCcont

0.0

-0.648

DS01

0.914

0.748

DS02

1.098

0.271

DS04

0.135

0.978

DS0c

1.367

0.773

GP01

-0.195

-0.832

GP02

2.351

-0.484

GP0c

0.09

-0.51

NOD

-0.257

-0.882

NZO

-0.309

-0.071

PWK

0.136

-0.915

H37Rv_KO_CtpC

-1.808

-1.154

H37Rv_KO_CtpD

0.0

-0.768

H37Rv_KO_Rv1272

-0.105

-0.908

H37Rv_KO_SugABC

1.89

0.718

H37Rv_KO_MbtN

-0.785

-1.808

Trans05

-0.995

-0.667

macrophage_unactivated

0.398

0.322

IL1

0.715

0.0

Rapamycin

0.0

-0.948

Tcell

1.134

0.042

GMCSF

0.919

-1.373

IFNab

0.193

-0.29

IFNg

0.337

-0.695

IFNg_GMCSF1

1.254

-0.126

Rv1432_day32

0.0

0.091

Rv1565c_day32

0.0

-2.147

secA2_input

2.171

0.686

delta_Rv3594

-0.802

-0.154

delta_Rv3717

0.291

-0.223

delta_Rv3811

-0.779

-0.311

delta_Rv0954

1.485

0.342

PonA1

-0.826

-1.002

EccD1_KO

-1.246

-0.059

EspI_KO

-0.328

0.342

PE35_KO

-0.898

-0.735

PPE68_KO

-1.213

-0.234

glycerol2

0.68

0.629

lignocerate

1.218

1.801

oleate

-0.829

0.115

phosphatidylcholine

0.679

0.845

acetate

1.32

1.616

glucAc

1.176

1.629

Rv0950ko

0.874

0.075

Rv1096ko

0.458

1.912

Rv3684ko

1.359

0.681

delta_otsA_trehalose

0.232

-1.112