TnSeqCorr

Top 10 genes with highest correlation to Rv2748c/ftsK:

update plotcorrelationlink to info on gene
Rv0116c/ldtA (cc=0.5142) info on Rv0116c/ldtA
Rv3707c/- (cc=0.5139) info on Rv3707c/-
Rv0530/- (cc=0.4922) info on Rv0530/-
Rv3522/ltp4 (cc=0.4866) info on Rv3522/ltp4
Rv1460/- (cc=0.4509) info on Rv1460/-
Rv1442/bisC (cc=0.4342) info on Rv1442/bisC
Rv3506/fadD17 (cc=0.4309) info on Rv3506/fadD17
Rv0442c/PPE10 (cc=0.4272) info on Rv0442c/PPE10
Rv0103c/ctpB (cc=0.4234) info on Rv0103c/ctpB
Rv0906/- (cc=0.4036) info on Rv0906/-

Correlation of Rv2748c/ftsK with Rv0530/-

Normalized LFCs for Rv2748c/ftsK:
(description and provenance of datasets)
Rv2748c/ftsKRv0530/-
Fe_supp_jason_reseq

0.878

-0.276

low_pH_jason_reseq

-0.303

-0.321

NO_jason_reseq

-1.016

0.236

B6_jason_reseq

0.74

0.625

MHCII_jason_reseq

1.731

0.96

Isoniazid02

0.097

0.292

Rifampicin4

-0.19

-0.222

Ethambutol3

0.159

0.582

Meropenem3

0.157

0.265

Vancomycin16

1.101

-0.838

Rv2680_day32

-1.231

-0.954

H37Rv_KO_MarP

0.0

0.12

hypoxia_3wks

-0.502

-0.57

hypoxia_6wks

-0.263

-0.23

glycerol

0.0

-0.044

cholesterol

0.149

-0.614

AJ

-0.173

0.309

Bibs02

0.065

0.351

Bibs02c

-0.506

0.333

BL6

0.129

-0.4

BL6a

0.07

0.042

BXD01

0.794

-0.154

BXD010

-0.975

-0.646

BXD011

-0.308

-0.259

BXD03

0.182

-0.672

BXD04

-0.357

0.031

BXD05

-0.389

-0.544

BXD06

-0.049

-0.618

BXD07

0.9

-0.137

BXD08

-0.322

-0.277

BXD09

-0.278

-0.568

CAST

0.0

0.864

CCcont

0.0

-0.12

DS01

0.914

1.025

DS02

1.098

-0.154

DS04

0.135

0.309

DS0c

1.367

0.787

GP01

-0.195

0.37

GP02

2.351

1.026

GP0c

0.09

0.212

NOD

-0.257

0.029

NZO

-0.309

0.026

PWK

0.136

0.742

H37Rv_KO_CtpC

-1.808

-0.435

H37Rv_KO_CtpD

0.0

0.327

H37Rv_KO_Rv1272

-0.105

-1.102

H37Rv_KO_SugABC

1.89

0.252

H37Rv_KO_MbtN

-0.785

0.125

Trans05

-0.995

-0.813

macrophage_unactivated

0.398

-0.331

IL1

0.715

0.208

Rapamycin

0.0

0.675

Tcell

1.134

-0.469

GMCSF

0.919

0.364

IFNab

0.193

-0.46

IFNg

0.337

-0.059

IFNg_GMCSF1

1.254

1.345

Rv1432_day32

0.0

0.849

Rv1565c_day32

0.0

-0.518

secA2_input

2.171

0.333

delta_Rv3594

-0.802

-0.393

delta_Rv3717

0.291

0.345

delta_Rv3811

-0.779

-0.256

delta_Rv0954

1.485

0.224

PonA1

-0.826

0.391

EccD1_KO

-1.246

-0.444

EspI_KO

-0.328

-0.536

PE35_KO

-0.898

-0.099

PPE68_KO

-1.213

-0.55

glycerol2

0.68

0.015

lignocerate

1.218

0.961

oleate

-0.829

-0.472

phosphatidylcholine

0.679

0.353

acetate

1.32

0.251

glucAc

1.176

0.367

Rv0950ko

0.874

0.244

Rv1096ko

0.458

0.29

Rv3684ko

1.359

0.39

delta_otsA_trehalose

0.232

0.888