TnSeqCorr

Top 10 genes with highest correlation to Rv2748c/ftsK:

update plotcorrelationlink to info on gene
Rv0116c/ldtA (cc=0.5142) info on Rv0116c/ldtA
Rv3707c/- (cc=0.5139) info on Rv3707c/-
Rv0530/- (cc=0.4922) info on Rv0530/-
Rv3522/ltp4 (cc=0.4866) info on Rv3522/ltp4
Rv1460/- (cc=0.4509) info on Rv1460/-
Rv1442/bisC (cc=0.4342) info on Rv1442/bisC
Rv3506/fadD17 (cc=0.4309) info on Rv3506/fadD17
Rv0442c/PPE10 (cc=0.4272) info on Rv0442c/PPE10
Rv0103c/ctpB (cc=0.4234) info on Rv0103c/ctpB
Rv0906/- (cc=0.4036) info on Rv0906/-

Correlation of Rv2748c/ftsK with Rv0442c/PPE10

Normalized LFCs for Rv2748c/ftsK:
(description and provenance of datasets)
Rv2748c/ftsKRv0442c/PPE10
Fe_supp_jason_reseq

0.878

-0.26

low_pH_jason_reseq

-0.303

-0.221

NO_jason_reseq

-1.016

0.228

B6_jason_reseq

0.74

-0.059

MHCII_jason_reseq

1.731

-0.082

Isoniazid02

0.097

0.109

Rifampicin4

-0.19

-0.089

Ethambutol3

0.159

0.0

Meropenem3

0.157

0.127

Vancomycin16

1.101

-0.029

Rv2680_day32

-1.231

0.028

H37Rv_KO_MarP

0.0

0.285

hypoxia_3wks

-0.502

-0.654

hypoxia_6wks

-0.263

-0.038

glycerol

0.0

-0.518

cholesterol

0.149

-0.426

AJ

-0.173

0.121

Bibs02

0.065

-0.469

Bibs02c

-0.506

-0.082

BL6

0.129

-0.557

BL6a

0.07

-0.298

BXD01

0.794

-0.367

BXD010

-0.975

-0.524

BXD011

-0.308

-0.383

BXD03

0.182

-0.879

BXD04

-0.357

-0.667

BXD05

-0.389

-0.413

BXD06

-0.049

-0.318

BXD07

0.9

-0.313

BXD08

-0.322

0.158

BXD09

-0.278

-0.343

CAST

0.0

-0.21

CCcont

0.0

-0.393

DS01

0.914

-0.395

DS02

1.098

0.395

DS04

0.135

-0.028

DS0c

1.367

-0.413

GP01

-0.195

0.024

GP02

2.351

1.034

GP0c

0.09

-0.278

NOD

-0.257

0.286

NZO

-0.309

-0.289

PWK

0.136

-0.21

H37Rv_KO_CtpC

-1.808

-0.499

H37Rv_KO_CtpD

0.0

-0.397

H37Rv_KO_Rv1272

-0.105

0.093

H37Rv_KO_SugABC

1.89

0.723

H37Rv_KO_MbtN

-0.785

-0.35

Trans05

-0.995

-0.849

macrophage_unactivated

0.398

-0.085

IL1

0.715

0.053

Rapamycin

0.0

0.135

Tcell

1.134

-0.209

GMCSF

0.919

0.383

IFNab

0.193

-0.281

IFNg

0.337

0.321

IFNg_GMCSF1

1.254

0.776

Rv1432_day32

0.0

0.31

Rv1565c_day32

0.0

-0.03

secA2_input

2.171

-0.462

delta_Rv3594

-0.802

-0.04

delta_Rv3717

0.291

-0.054

delta_Rv3811

-0.779

-0.69

delta_Rv0954

1.485

-0.554

PonA1

-0.826

-0.576

EccD1_KO

-1.246

-0.312

EspI_KO

-0.328

0.228

PE35_KO

-0.898

-0.277

PPE68_KO

-1.213

-0.179

glycerol2

0.68

0.345

lignocerate

1.218

0.928

oleate

-0.829

-0.421

phosphatidylcholine

0.679

0.536

acetate

1.32

0.618

glucAc

1.176

0.624

Rv0950ko

0.874

0.389

Rv1096ko

0.458

0.296

Rv3684ko

1.359

0.622

delta_otsA_trehalose

0.232

1.603