Top 10 genes with highest correlation to Rv2744c/35kd_ag:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1747/- | (cc=0.4952) | info on Rv1747/- |
| Rv1411c/lprG | (cc=0.4725) | info on Rv1411c/lprG |
| Rv0645c/mmaA1 | (cc=0.4523) | info on Rv0645c/mmaA1 |
| Rv2197c/- | (cc=0.4496) | info on Rv2197c/- |
| Rv0472c/- | (cc=0.4398) | info on Rv0472c/- |
| Rv0431/- | (cc=0.4355) | info on Rv0431/- |
| Rv0206c/mmpL3 | (cc=0.4349) | info on Rv0206c/mmpL3 |
| Rv3852/hns | (cc=0.4337) | info on Rv3852/hns |
| Rv3267/- | (cc=0.4289) | info on Rv3267/- |
| Rv2250c/- | (cc=0.4212) | info on Rv2250c/- |
Correlation of Rv2744c/35kd_ag with Rv1411c/lprG
Normalized LFCs for Rv2744c/35kd_ag:
(description and provenance of datasets)
| Rv2744c/35kd_ag | Rv1411c/lprG | |
| Fe_supp_jason_reseq | 0.578 | 3.964 |
| low_pH_jason_reseq | 0.276 | 0.0 |
| NO_jason_reseq | 0.247 | 0.0 |
| B6_jason_reseq | 1.557 | 0.0 |
| MHCII_jason_reseq | -0.93 | 0.0 |
| Isoniazid02 | -0.831 | 1.312 |
| Rifampicin4 | -2.177 | -6.0 |
| Ethambutol3 | -0.372 | -2.503 |
| Meropenem3 | -1.024 | -2.344 |
| Vancomycin16 | -2.831 | -6.0 |
| Rv2680_day32 | 2.561 | 0.0 |
| H37Rv_KO_MarP | -1.829 | -4.73 |
| hypoxia_3wks | -1.16 | 1.176 |
| hypoxia_6wks | 0.578 | 1.725 |
| glycerol | 1.593 | 4.535 |
| cholesterol | 0.093 | 2.347 |
| AJ | -0.245 | -0.815 |
| Bibs02 | -0.67 | -0.642 |
| Bibs02c | -1.176 | -0.735 |
| BL6 | 0.588 | -0.315 |
| BL6a | -0.155 | -0.154 |
| BXD01 | 0.284 | -0.458 |
| BXD010 | 0.582 | -0.45 |
| BXD011 | 1.268 | 0.258 |
| BXD03 | -0.86 | -0.475 |
| BXD04 | 0.099 | -0.434 |
| BXD05 | 0.338 | 0.0 |
| BXD06 | 0.887 | -0.469 |
| BXD07 | 0.864 | -0.486 |
| BXD08 | 0.476 | -0.467 |
| BXD09 | 0.81 | -0.494 |
| CAST | -0.397 | -0.809 |
| CCcont | 0.366 | 3.583 |
| DS01 | -1.853 | -0.83 |
| DS02 | -0.673 | -0.764 |
| DS04 | -1.325 | 0.822 |
| DS0c | -0.112 | -0.762 |
| GP01 | -0.847 | -0.249 |
| GP02 | 0.17 | -0.292 |
| GP0c | -0.807 | 1.392 |
| NOD | 0.233 | -0.789 |
| NZO | 0.207 | -0.701 |
| PWK | -0.171 | -0.689 |
| H37Rv_KO_CtpC | 0.746 | 0.606 |
| H37Rv_KO_CtpD | -1.111 | 0.473 |
| H37Rv_KO_Rv1272 | 1.747 | -0.356 |
| H37Rv_KO_SugABC | -2.128 | 0.718 |
| H37Rv_KO_MbtN | 1.644 | 1.904 |
| Trans05 | 1.154 | -0.21 |
| macrophage_unactivated | -0.167 | -1.016 |
| IL1 | -0.077 | -0.955 |
| Rapamycin | 0.433 | 0.0 |
| Tcell | -0.085 | -1.049 |
| GMCSF | -0.681 | 0.0 |
| IFNab | 0.13 | 3.304 |
| IFNg | -0.192 | -1.563 |
| IFNg_GMCSF1 | 0.918 | -1.012 |
| Rv1432_day32 | 1.168 | -1.106 |
| Rv1565c_day32 | -0.088 | 0.0 |
| secA2_input | 0.166 | 1.331 |
| delta_Rv3594 | 0.665 | 1.49 |
| delta_Rv3717 | 0.386 | 2.768 |
| delta_Rv3811 | 0.266 | 0.953 |
| delta_Rv0954 | -0.517 | -3.981 |
| PonA1 | -0.576 | -2.838 |
| EccD1_KO | -1.667 | -2.746 |
| EspI_KO | -0.75 | -2.484 |
| PE35_KO | -0.554 | -2.789 |
| PPE68_KO | -0.806 | -2.7 |
| glycerol2 | 2.404 | 0.0 |
| lignocerate | 1.425 | 0.0 |
| oleate | 1.207 | 0.0 |
| phosphatidylcholine | 1.382 | 0.0 |
| acetate | 0.283 | 0.0 |
| glucAc | 0.513 | 0.392 |
| Rv0950ko | 0.223 | 0.193 |
| Rv1096ko | 1.046 | -0.41 |
| Rv3684ko | 0.671 | 1.189 |
| delta_otsA_trehalose | -0.735 | -0.468 |