Top 10 genes with highest correlation to Rv2740/ephG:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3165c/- | (cc=0.4995) | info on Rv3165c/- |
| Rv2060/- | (cc=0.4512) | info on Rv2060/- |
| Rv2308/- | (cc=0.4399) | info on Rv2308/- |
| Rv1218c/- | (cc=0.4285) | info on Rv1218c/- |
| Rv2040c/- | (cc=0.4014) | info on Rv2040c/- |
| Rv1954A/- | (cc=0.3991) | info on Rv1954A/- |
| Rv1353c/- | (cc=0.3983) | info on Rv1353c/- |
| Rv2408/PE24 | (cc=0.3907) | info on Rv2408/PE24 |
| Rv1496/- | (cc=0.3907) | info on Rv1496/- |
| Rv2252/- | (cc=0.3881) | info on Rv2252/- |
Correlation of Rv2740/ephG with Rv2060/-
Normalized LFCs for Rv2740/ephG:
(description and provenance of datasets)
| Rv2740/ephG | Rv2060/- | |
| Fe_supp_jason_reseq | 0.23 | -0.103 |
| low_pH_jason_reseq | -0.579 | -1.673 |
| NO_jason_reseq | -0.735 | -0.601 |
| B6_jason_reseq | -0.318 | -3.069 |
| MHCII_jason_reseq | 0.109 | -0.784 |
| Isoniazid02 | -0.389 | 3.405 |
| Rifampicin4 | -0.127 | 0.969 |
| Ethambutol3 | -0.264 | 2.606 |
| Meropenem3 | -0.299 | 0.289 |
| Vancomycin16 | -0.631 | -0.52 |
| Rv2680_day32 | 1.128 | 0.249 |
| H37Rv_KO_MarP | -0.292 | -0.471 |
| hypoxia_3wks | -0.67 | -1.894 |
| hypoxia_6wks | -0.238 | -0.393 |
| glycerol | -0.307 | -1.549 |
| cholesterol | -0.285 | -0.229 |
| AJ | -0.183 | -1.321 |
| Bibs02 | -0.585 | -3.076 |
| Bibs02c | -0.77 | -0.182 |
| BL6 | -0.372 | 1.112 |
| BL6a | 0.281 | 1.633 |
| BXD01 | -0.235 | 1.966 |
| BXD010 | 0.365 | 1.646 |
| BXD011 | 0.709 | 0.053 |
| BXD03 | 0.492 | 0.455 |
| BXD04 | -0.043 | 2.675 |
| BXD05 | 0.429 | 0.493 |
| BXD06 | 0.072 | 2.147 |
| BXD07 | 0.409 | 0.883 |
| BXD08 | 0.616 | 2.281 |
| BXD09 | 0.427 | 0.813 |
| CAST | 0.327 | 0.844 |
| CCcont | -0.113 | 2.499 |
| DS01 | -1.258 | -1.916 |
| DS02 | -1.3 | -1.238 |
| DS04 | 0.066 | -2.311 |
| DS0c | -0.757 | -3.432 |
| GP01 | 0.403 | -1.661 |
| GP02 | 0.014 | -1.171 |
| GP0c | 0.834 | -0.446 |
| NOD | -0.135 | -0.838 |
| NZO | 0.428 | -2.51 |
| PWK | -0.675 | 0.631 |
| H37Rv_KO_CtpC | -0.598 | -2.423 |
| H37Rv_KO_CtpD | 0.479 | 1.775 |
| H37Rv_KO_Rv1272 | 0.103 | -0.484 |
| H37Rv_KO_SugABC | -2.096 | -1.666 |
| H37Rv_KO_MbtN | -0.306 | -1.631 |
| Trans05 | 0.053 | 1.218 |
| macrophage_unactivated | -0.227 | 3.671 |
| IL1 | 0.448 | 1.619 |
| Rapamycin | 0.672 | 0.733 |
| Tcell | -0.635 | 3.874 |
| GMCSF | 0.734 | -0.755 |
| IFNab | 0.36 | 0.493 |
| IFNg | 0.222 | -1.16 |
| IFNg_GMCSF1 | -0.544 | -0.28 |
| Rv1432_day32 | -0.327 | 0.0 |
| Rv1565c_day32 | 0.826 | 0.855 |
| secA2_input | -2.057 | -1.227 |
| delta_Rv3594 | 0.217 | 1.146 |
| delta_Rv3717 | 1.121 | 2.154 |
| delta_Rv3811 | -0.311 | 0.451 |
| delta_Rv0954 | -1.55 | -0.549 |
| PonA1 | 0.187 | -2.016 |
| EccD1_KO | 1.217 | 2.23 |
| EspI_KO | 0.704 | 1.266 |
| PE35_KO | 0.933 | 3.241 |
| PPE68_KO | 1.094 | 4.62 |
| glycerol2 | 0.404 | 1.84 |
| lignocerate | 0.479 | 2.661 |
| oleate | -0.713 | -1.843 |
| phosphatidylcholine | 0.625 | 2.134 |
| acetate | 0.356 | 1.754 |
| glucAc | 0.869 | 1.848 |
| Rv0950ko | 0.241 | 3.784 |
| Rv1096ko | 0.47 | 2.494 |
| Rv3684ko | -0.174 | -0.314 |
| delta_otsA_trehalose | 0.404 | 0.818 |