Top 10 genes with highest correlation to Rv2740/ephG:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3165c/- | (cc=0.4995) | info on Rv3165c/- |
| Rv2060/- | (cc=0.4512) | info on Rv2060/- |
| Rv2308/- | (cc=0.4399) | info on Rv2308/- |
| Rv1218c/- | (cc=0.4285) | info on Rv1218c/- |
| Rv2040c/- | (cc=0.4014) | info on Rv2040c/- |
| Rv1954A/- | (cc=0.3991) | info on Rv1954A/- |
| Rv1353c/- | (cc=0.3983) | info on Rv1353c/- |
| Rv2408/PE24 | (cc=0.3907) | info on Rv2408/PE24 |
| Rv1496/- | (cc=0.3907) | info on Rv1496/- |
| Rv2252/- | (cc=0.3881) | info on Rv2252/- |
Correlation of Rv2740/ephG with Rv1218c/-
Normalized LFCs for Rv2740/ephG:
(description and provenance of datasets)
| Rv2740/ephG | Rv1218c/- | |
| Fe_supp_jason_reseq | 0.23 | 0.395 |
| low_pH_jason_reseq | -0.579 | -0.9 |
| NO_jason_reseq | -0.735 | -0.845 |
| B6_jason_reseq | -0.318 | -0.335 |
| MHCII_jason_reseq | 0.109 | -1.292 |
| Isoniazid02 | -0.389 | -0.144 |
| Rifampicin4 | -0.127 | 0.19 |
| Ethambutol3 | -0.264 | -0.12 |
| Meropenem3 | -0.299 | -0.631 |
| Vancomycin16 | -0.631 | -0.435 |
| Rv2680_day32 | 1.128 | 1.257 |
| H37Rv_KO_MarP | -0.292 | 0.995 |
| hypoxia_3wks | -0.67 | 0.044 |
| hypoxia_6wks | -0.238 | -1.1 |
| glycerol | -0.307 | -0.551 |
| cholesterol | -0.285 | 0.017 |
| AJ | -0.183 | 0.264 |
| Bibs02 | -0.585 | 0.086 |
| Bibs02c | -0.77 | -0.324 |
| BL6 | -0.372 | 0.115 |
| BL6a | 0.281 | 0.225 |
| BXD01 | -0.235 | 0.356 |
| BXD010 | 0.365 | 0.856 |
| BXD011 | 0.709 | 1.3 |
| BXD03 | 0.492 | 1.231 |
| BXD04 | -0.043 | 0.947 |
| BXD05 | 0.429 | 1.639 |
| BXD06 | 0.072 | 0.015 |
| BXD07 | 0.409 | 1.183 |
| BXD08 | 0.616 | 0.691 |
| BXD09 | 0.427 | 1.068 |
| CAST | 0.327 | 0.734 |
| CCcont | -0.113 | 0.394 |
| DS01 | -1.258 | 0.0 |
| DS02 | -1.3 | 0.384 |
| DS04 | 0.066 | -0.247 |
| DS0c | -0.757 | -0.768 |
| GP01 | 0.403 | 0.733 |
| GP02 | 0.014 | 1.787 |
| GP0c | 0.834 | 1.472 |
| NOD | -0.135 | -0.055 |
| NZO | 0.428 | -0.074 |
| PWK | -0.675 | -0.146 |
| H37Rv_KO_CtpC | -0.598 | 0.518 |
| H37Rv_KO_CtpD | 0.479 | 0.448 |
| H37Rv_KO_Rv1272 | 0.103 | 1.013 |
| H37Rv_KO_SugABC | -2.096 | 0.194 |
| H37Rv_KO_MbtN | -0.306 | -0.013 |
| Trans05 | 0.053 | 0.63 |
| macrophage_unactivated | -0.227 | 0.262 |
| IL1 | 0.448 | 0.673 |
| Rapamycin | 0.672 | 0.525 |
| Tcell | -0.635 | -0.326 |
| GMCSF | 0.734 | 0.742 |
| IFNab | 0.36 | 0.574 |
| IFNg | 0.222 | 1.216 |
| IFNg_GMCSF1 | -0.544 | 0.446 |
| Rv1432_day32 | -0.327 | 0.0 |
| Rv1565c_day32 | 0.826 | 0.057 |
| secA2_input | -2.057 | -0.407 |
| delta_Rv3594 | 0.217 | 1.331 |
| delta_Rv3717 | 1.121 | -0.413 |
| delta_Rv3811 | -0.311 | 1.437 |
| delta_Rv0954 | -1.55 | -0.183 |
| PonA1 | 0.187 | 0.511 |
| EccD1_KO | 1.217 | 1.131 |
| EspI_KO | 0.704 | 0.402 |
| PE35_KO | 0.933 | 0.875 |
| PPE68_KO | 1.094 | 0.96 |
| glycerol2 | 0.404 | -0.343 |
| lignocerate | 0.479 | 0.449 |
| oleate | -0.713 | -0.19 |
| phosphatidylcholine | 0.625 | 0.339 |
| acetate | 0.356 | -0.223 |
| glucAc | 0.869 | -0.281 |
| Rv0950ko | 0.241 | -0.184 |
| Rv1096ko | 0.47 | 0.507 |
| Rv3684ko | -0.174 | -0.301 |
| delta_otsA_trehalose | 0.404 | -0.324 |