Top 10 genes with highest correlation to Rv2721c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1334/mec | (cc=0.6386) | info on Rv1334/mec |
| Rv1336/cysM | (cc=0.615) | info on Rv1336/cysM |
| Rv2722/- | (cc=0.583) | info on Rv2722/- |
| Rv3842c/glpQ1 | (cc=0.5726) | info on Rv3842c/glpQ1 |
| Rv0877/- | (cc=0.5564) | info on Rv0877/- |
| Rv1337/- | (cc=0.5551) | info on Rv1337/- |
| Rv1546/- | (cc=0.5285) | info on Rv1546/- |
| Rv3419c/gcp | (cc=0.5089) | info on Rv3419c/gcp |
| Rv0047c/- | (cc=0.5086) | info on Rv0047c/- |
| Rv0183/- | (cc=0.4965) | info on Rv0183/- |
Correlation of Rv2721c/- with Rv3419c/gcp
Normalized LFCs for Rv2721c/-:
(description and provenance of datasets)
| Rv2721c/- | Rv3419c/gcp | |
| Fe_supp_jason_reseq | -2.837 | -1.455 |
| low_pH_jason_reseq | -0.529 | 0.353 |
| NO_jason_reseq | 2.3 | 3.179 |
| B6_jason_reseq | 0.429 | 0.578 |
| MHCII_jason_reseq | -0.858 | -1.332 |
| Isoniazid02 | 1.486 | -1.685 |
| Rifampicin4 | 2.231 | 0.845 |
| Ethambutol3 | -0.439 | 1.389 |
| Meropenem3 | 2.082 | 0.0 |
| Vancomycin16 | -0.738 | 0.13 |
| Rv2680_day32 | -0.384 | -0.811 |
| H37Rv_KO_MarP | -0.47 | -0.44 |
| hypoxia_3wks | 0.965 | 0.0 |
| hypoxia_6wks | 2.957 | 0.0 |
| glycerol | -0.262 | -0.083 |
| cholesterol | 0.358 | -1.447 |
| AJ | -0.024 | 1.536 |
| Bibs02 | -0.109 | -0.703 |
| Bibs02c | -0.677 | -0.467 |
| BL6 | 0.481 | 2.916 |
| BL6a | 0.408 | 1.474 |
| BXD01 | 0.676 | 2.919 |
| BXD010 | 0.875 | 2.677 |
| BXD011 | 1.091 | 3.476 |
| BXD03 | 1.083 | 3.152 |
| BXD04 | 1.654 | 3.199 |
| BXD05 | 0.924 | 2.698 |
| BXD06 | 1.501 | 3.834 |
| BXD07 | 0.721 | 2.848 |
| BXD08 | 0.778 | 3.06 |
| BXD09 | 0.469 | 2.295 |
| CAST | 0.853 | 2.279 |
| CCcont | -0.211 | 2.265 |
| DS01 | -1.128 | -0.775 |
| DS02 | -1.475 | -0.181 |
| DS04 | -0.36 | 0.873 |
| DS0c | -1.193 | -0.278 |
| GP01 | 1.362 | -0.888 |
| GP02 | 0.963 | -0.831 |
| GP0c | 1.455 | 0.775 |
| NOD | 0.602 | 1.01 |
| NZO | 0.04 | 1.777 |
| PWK | 1.851 | 3.711 |
| H37Rv_KO_CtpC | -0.94 | 1.272 |
| H37Rv_KO_CtpD | 0.542 | 2.089 |
| H37Rv_KO_Rv1272 | -0.183 | 0.993 |
| H37Rv_KO_SugABC | 0.602 | 1.521 |
| H37Rv_KO_MbtN | 1.345 | 1.977 |
| Trans05 | 0.662 | 1.517 |
| macrophage_unactivated | -0.846 | -1.045 |
| IL1 | -0.196 | -0.715 |
| Rapamycin | -0.516 | -1.795 |
| Tcell | -0.264 | 0.349 |
| GMCSF | -0.04 | -1.127 |
| IFNab | 0.339 | 0.813 |
| IFNg | -0.326 | -1.141 |
| IFNg_GMCSF1 | -0.434 | -1.191 |
| Rv1432_day32 | -0.404 | -0.395 |
| Rv1565c_day32 | 0.945 | -0.262 |
| secA2_input | -0.128 | -0.163 |
| delta_Rv3594 | 0.262 | 0.598 |
| delta_Rv3717 | 0.683 | 0.992 |
| delta_Rv3811 | 0.578 | 0.949 |
| delta_Rv0954 | 0.066 | -0.774 |
| PonA1 | -0.829 | 0.121 |
| EccD1_KO | -0.079 | 0.368 |
| EspI_KO | -0.277 | -1.229 |
| PE35_KO | 0.114 | -0.353 |
| PPE68_KO | -0.618 | -0.307 |
| glycerol2 | -0.673 | -1.808 |
| lignocerate | -1.168 | -1.93 |
| oleate | 1.056 | -1.829 |
| phosphatidylcholine | -2.244 | -2.043 |
| acetate | -0.374 | -1.453 |
| glucAc | -0.403 | 1.045 |
| Rv0950ko | 0.28 | 0.419 |
| Rv1096ko | 0.0 | -0.259 |
| Rv3684ko | 0.878 | 1.15 |
| delta_otsA_trehalose | 0.575 | 0.965 |