Top 10 genes with highest correlation to Rv2721c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1334/mec | (cc=0.6386) | info on Rv1334/mec |
| Rv1336/cysM | (cc=0.615) | info on Rv1336/cysM |
| Rv2722/- | (cc=0.583) | info on Rv2722/- |
| Rv3842c/glpQ1 | (cc=0.5726) | info on Rv3842c/glpQ1 |
| Rv0877/- | (cc=0.5564) | info on Rv0877/- |
| Rv1337/- | (cc=0.5551) | info on Rv1337/- |
| Rv1546/- | (cc=0.5285) | info on Rv1546/- |
| Rv3419c/gcp | (cc=0.5089) | info on Rv3419c/gcp |
| Rv0047c/- | (cc=0.5086) | info on Rv0047c/- |
| Rv0183/- | (cc=0.4965) | info on Rv0183/- |
Correlation of Rv2721c/- with Rv0047c/-
Normalized LFCs for Rv2721c/-:
(description and provenance of datasets)
| Rv2721c/- | Rv0047c/- | |
| Fe_supp_jason_reseq | -2.837 | -2.182 |
| low_pH_jason_reseq | -0.529 | 3.995 |
| NO_jason_reseq | 2.3 | 4.009 |
| B6_jason_reseq | 0.429 | 1.375 |
| MHCII_jason_reseq | -0.858 | -1.004 |
| Isoniazid02 | 1.486 | -0.469 |
| Rifampicin4 | 2.231 | -1.519 |
| Ethambutol3 | -0.439 | 2.698 |
| Meropenem3 | 2.082 | -2.017 |
| Vancomycin16 | -0.738 | -0.854 |
| Rv2680_day32 | -0.384 | -1.555 |
| H37Rv_KO_MarP | -0.47 | -2.135 |
| hypoxia_3wks | 0.965 | -2.153 |
| hypoxia_6wks | 2.957 | 2.742 |
| glycerol | -0.262 | -1.292 |
| cholesterol | 0.358 | -3.05 |
| AJ | -0.024 | 0.064 |
| Bibs02 | -0.109 | -3.399 |
| Bibs02c | -0.677 | -4.636 |
| BL6 | 0.481 | 0.41 |
| BL6a | 0.408 | 0.393 |
| BXD01 | 0.676 | 2.796 |
| BXD010 | 0.875 | 1.211 |
| BXD011 | 1.091 | 4.624 |
| BXD03 | 1.083 | 0.258 |
| BXD04 | 1.654 | 1.291 |
| BXD05 | 0.924 | 2.518 |
| BXD06 | 1.501 | 2.981 |
| BXD07 | 0.721 | 2.316 |
| BXD08 | 0.778 | 3.78 |
| BXD09 | 0.469 | 1.297 |
| CAST | 0.853 | 0.205 |
| CCcont | -0.211 | -0.493 |
| DS01 | -1.128 | -5.234 |
| DS02 | -1.475 | -4.819 |
| DS04 | -0.36 | -2.339 |
| DS0c | -1.193 | -2.461 |
| GP01 | 1.362 | 3.121 |
| GP02 | 0.963 | 0.487 |
| GP0c | 1.455 | 2.218 |
| NOD | 0.602 | -2.125 |
| NZO | 0.04 | 0.558 |
| PWK | 1.851 | 2.998 |
| H37Rv_KO_CtpC | -0.94 | -2.455 |
| H37Rv_KO_CtpD | 0.542 | 0.102 |
| H37Rv_KO_Rv1272 | -0.183 | -0.797 |
| H37Rv_KO_SugABC | 0.602 | 2.067 |
| H37Rv_KO_MbtN | 1.345 | 2.182 |
| Trans05 | 0.662 | 0.836 |
| macrophage_unactivated | -0.846 | -4.129 |
| IL1 | -0.196 | 0.163 |
| Rapamycin | -0.516 | -2.403 |
| Tcell | -0.264 | 0.603 |
| GMCSF | -0.04 | -3.501 |
| IFNab | 0.339 | -1.294 |
| IFNg | -0.326 | -1.849 |
| IFNg_GMCSF1 | -0.434 | -2.24 |
| Rv1432_day32 | -0.404 | -0.013 |
| Rv1565c_day32 | 0.945 | -4.786 |
| secA2_input | -0.128 | 0.504 |
| delta_Rv3594 | 0.262 | -0.399 |
| delta_Rv3717 | 0.683 | 1.969 |
| delta_Rv3811 | 0.578 | 0.419 |
| delta_Rv0954 | 0.066 | -0.37 |
| PonA1 | -0.829 | -1.716 |
| EccD1_KO | -0.079 | -1.227 |
| EspI_KO | -0.277 | -0.824 |
| PE35_KO | 0.114 | -1.855 |
| PPE68_KO | -0.618 | -1.952 |
| glycerol2 | -0.673 | 1.351 |
| lignocerate | -1.168 | -1.002 |
| oleate | 1.056 | 0.543 |
| phosphatidylcholine | -2.244 | 0.011 |
| acetate | -0.374 | -0.69 |
| glucAc | -0.403 | -1.622 |
| Rv0950ko | 0.28 | -0.675 |
| Rv1096ko | 0.0 | -1.137 |
| Rv3684ko | 0.878 | 2.315 |
| delta_otsA_trehalose | 0.575 | -1.257 |