Top 10 genes with highest correlation to Rv2721c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv1334/mec | (cc=0.6386) | info on Rv1334/mec |
Rv1336/cysM | (cc=0.615) | info on Rv1336/cysM |
Rv2722/- | (cc=0.583) | info on Rv2722/- |
Rv3842c/glpQ1 | (cc=0.5726) | info on Rv3842c/glpQ1 |
Rv0877/- | (cc=0.5564) | info on Rv0877/- |
Rv1337/- | (cc=0.5551) | info on Rv1337/- |
Rv1546/- | (cc=0.5285) | info on Rv1546/- |
Rv3419c/gcp | (cc=0.5089) | info on Rv3419c/gcp |
Rv0047c/- | (cc=0.5086) | info on Rv0047c/- |
Rv0183/- | (cc=0.4965) | info on Rv0183/- |
Correlation of Rv2721c/- with Rv1334/mec
Normalized LFCs for Rv2721c/-:
(description and provenance of datasets)
Rv2721c/- | Rv1334/mec | |
Fe_supp_jason_reseq | -2.837 | -1.481 |
low_pH_jason_reseq | -0.529 | -0.197 |
NO_jason_reseq | 2.3 | 1.011 |
B6_jason_reseq | 0.429 | -0.525 |
MHCII_jason_reseq | -0.858 | -0.587 |
Isoniazid02 | 1.486 | 1.746 |
Rifampicin4 | 2.231 | 0.127 |
Ethambutol3 | -0.439 | 0.078 |
Meropenem3 | 2.082 | 0.642 |
Vancomycin16 | -0.738 | 1.117 |
Rv2680_day32 | -0.384 | 0.825 |
H37Rv_KO_MarP | -0.47 | 0.268 |
hypoxia_3wks | 0.965 | 1.826 |
hypoxia_6wks | 2.957 | 2.462 |
glycerol | -0.262 | 0.057 |
cholesterol | 0.358 | 0.261 |
AJ | -0.024 | -0.324 |
Bibs02 | -0.109 | -0.542 |
Bibs02c | -0.677 | 0.597 |
BL6 | 0.481 | 0.722 |
BL6a | 0.408 | 1.194 |
BXD01 | 0.676 | 1.351 |
BXD010 | 0.875 | 1.985 |
BXD011 | 1.091 | 2.172 |
BXD03 | 1.083 | 0.748 |
BXD04 | 1.654 | 1.201 |
BXD05 | 0.924 | 1.843 |
BXD06 | 1.501 | 1.645 |
BXD07 | 0.721 | 1.663 |
BXD08 | 0.778 | 1.376 |
BXD09 | 0.469 | 1.363 |
CAST | 0.853 | -0.813 |
CCcont | -0.211 | -0.134 |
DS01 | -1.128 | -0.987 |
DS02 | -1.475 | -1.089 |
DS04 | -0.36 | -0.523 |
DS0c | -1.193 | -0.137 |
GP01 | 1.362 | 0.192 |
GP02 | 0.963 | 0.74 |
GP0c | 1.455 | 1.04 |
NOD | 0.602 | 0.151 |
NZO | 0.04 | 0.325 |
PWK | 1.851 | -0.176 |
H37Rv_KO_CtpC | -0.94 | -0.648 |
H37Rv_KO_CtpD | 0.542 | -0.362 |
H37Rv_KO_Rv1272 | -0.183 | 0.7 |
H37Rv_KO_SugABC | 0.602 | 1.725 |
H37Rv_KO_MbtN | 1.345 | 1.499 |
Trans05 | 0.662 | 0.873 |
macrophage_unactivated | -0.846 | -2.108 |
IL1 | -0.196 | 1.356 |
Rapamycin | -0.516 | -0.384 |
Tcell | -0.264 | -0.609 |
GMCSF | -0.04 | -1.04 |
IFNab | 0.339 | 0.46 |
IFNg | -0.326 | 0.182 |
IFNg_GMCSF1 | -0.434 | 0.053 |
Rv1432_day32 | -0.404 | 0.245 |
Rv1565c_day32 | 0.945 | -0.828 |
secA2_input | -0.128 | 0.204 |
delta_Rv3594 | 0.262 | 0.704 |
delta_Rv3717 | 0.683 | 2.015 |
delta_Rv3811 | 0.578 | 1.691 |
delta_Rv0954 | 0.066 | -0.207 |
PonA1 | -0.829 | -0.103 |
EccD1_KO | -0.079 | -0.957 |
EspI_KO | -0.277 | -1.001 |
PE35_KO | 0.114 | -1.149 |
PPE68_KO | -0.618 | -1.085 |
glycerol2 | -0.673 | -0.82 |
lignocerate | -1.168 | -2.169 |
oleate | 1.056 | 1.965 |
phosphatidylcholine | -2.244 | -1.476 |
acetate | -0.374 | -0.755 |
glucAc | -0.403 | -0.862 |
Rv0950ko | 0.28 | -0.473 |
Rv1096ko | 0.0 | 0.03 |
Rv3684ko | 0.878 | 0.321 |
delta_otsA_trehalose | 0.575 | 0.117 |