Top 10 genes with highest correlation to Rv2712c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3906c/- | (cc=0.5133) | info on Rv3906c/- |
| Rv0325/- | (cc=0.506) | info on Rv0325/- |
| Rv2020c/- | (cc=0.4764) | info on Rv2020c/- |
| Rv1688/mpg | (cc=0.4674) | info on Rv1688/mpg |
| Rv2238c/ahpE | (cc=0.4601) | info on Rv2238c/ahpE |
| Rv2629/- | (cc=0.4594) | info on Rv2629/- |
| Rv0735/sigL | (cc=0.4409) | info on Rv0735/sigL |
| Rv0747/PE_PGRS10 | (cc=0.4391) | info on Rv0747/PE_PGRS10 |
| Rv1378c/- | (cc=0.4338) | info on Rv1378c/- |
| Rv1442/bisC | (cc=0.4318) | info on Rv1442/bisC |
Correlation of Rv2712c/- with Rv2238c/ahpE
Normalized LFCs for Rv2712c/-:
(description and provenance of datasets)
| Rv2712c/- | Rv2238c/ahpE | |
| Fe_supp_jason_reseq | -0.046 | 2.038 |
| low_pH_jason_reseq | 0.4 | -1.432 |
| NO_jason_reseq | 0.407 | 1.04 |
| B6_jason_reseq | -0.54 | 2.593 |
| MHCII_jason_reseq | 0.617 | 0.036 |
| Isoniazid02 | 1.487 | 0.861 |
| Rifampicin4 | 0.157 | 0.761 |
| Ethambutol3 | 0.969 | 0.72 |
| Meropenem3 | 0.424 | -0.081 |
| Vancomycin16 | 0.393 | -0.78 |
| Rv2680_day32 | -0.083 | -0.459 |
| H37Rv_KO_MarP | -0.697 | 0.358 |
| hypoxia_3wks | -0.395 | -1.898 |
| hypoxia_6wks | 0.207 | -1.733 |
| glycerol | 0.619 | 0.312 |
| cholesterol | 0.377 | 0.605 |
| AJ | 0.469 | -0.983 |
| Bibs02 | 0.499 | -0.26 |
| Bibs02c | -0.482 | -2.739 |
| BL6 | -0.561 | -2.406 |
| BL6a | -0.677 | -1.913 |
| BXD01 | 0.042 | -2.376 |
| BXD010 | -0.847 | -2.463 |
| BXD011 | -0.236 | -0.987 |
| BXD03 | -0.403 | -2.467 |
| BXD04 | -0.368 | -2.143 |
| BXD05 | -0.132 | -1.762 |
| BXD06 | -0.136 | -2.567 |
| BXD07 | -0.231 | -1.523 |
| BXD08 | -0.171 | -1.821 |
| BXD09 | -0.144 | -2.209 |
| CAST | 0.01 | -0.757 |
| CCcont | -0.553 | -2.724 |
| DS01 | 0.228 | 0.039 |
| DS02 | 0.38 | 0.271 |
| DS04 | -0.287 | -0.389 |
| DS0c | -0.321 | 0.679 |
| GP01 | -0.631 | -1.629 |
| GP02 | 0.535 | -1.442 |
| GP0c | 0.077 | -2.145 |
| NOD | -0.189 | -0.542 |
| NZO | 0.342 | 0.364 |
| PWK | 0.233 | 0.244 |
| H37Rv_KO_CtpC | -0.718 | -0.169 |
| H37Rv_KO_CtpD | 0.462 | 0.177 |
| H37Rv_KO_Rv1272 | -0.499 | -1.619 |
| H37Rv_KO_SugABC | 0.594 | -1.297 |
| H37Rv_KO_MbtN | 0.382 | -0.207 |
| Trans05 | -0.237 | -1.566 |
| macrophage_unactivated | -0.095 | -0.83 |
| IL1 | 0.154 | -0.78 |
| Rapamycin | -0.31 | -0.807 |
| Tcell | -0.225 | -0.411 |
| GMCSF | 0.378 | -0.333 |
| IFNab | 0.514 | -0.381 |
| IFNg | -0.102 | -0.703 |
| IFNg_GMCSF1 | 0.321 | 2.951 |
| Rv1432_day32 | 0.094 | 0.0 |
| Rv1565c_day32 | 0.341 | 0.0 |
| secA2_input | -0.351 | -3.478 |
| delta_Rv3594 | 0.207 | -1.576 |
| delta_Rv3717 | -0.457 | -1.198 |
| delta_Rv3811 | -0.055 | -2.492 |
| delta_Rv0954 | -0.479 | -1.206 |
| PonA1 | -0.196 | -1.309 |
| EccD1_KO | 0.526 | -0.204 |
| EspI_KO | 0.365 | -1.877 |
| PE35_KO | -0.551 | -2.208 |
| PPE68_KO | -0.378 | -2.208 |
| glycerol2 | 0.161 | 0.0 |
| lignocerate | 0.622 | 0.0 |
| oleate | 0.736 | 0.0 |
| phosphatidylcholine | 0.655 | 0.0 |
| acetate | 0.336 | 0.0 |
| glucAc | 0.187 | 0.0 |
| Rv0950ko | 0.214 | -0.425 |
| Rv1096ko | 0.042 | 0.911 |
| Rv3684ko | 0.072 | -1.11 |
| delta_otsA_trehalose | 0.576 | 1.131 |