Top 10 genes with highest correlation to Rv2712c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3906c/- | (cc=0.5133) | info on Rv3906c/- |
| Rv0325/- | (cc=0.506) | info on Rv0325/- |
| Rv2020c/- | (cc=0.4764) | info on Rv2020c/- |
| Rv1688/mpg | (cc=0.4674) | info on Rv1688/mpg |
| Rv2238c/ahpE | (cc=0.4601) | info on Rv2238c/ahpE |
| Rv2629/- | (cc=0.4594) | info on Rv2629/- |
| Rv0735/sigL | (cc=0.4409) | info on Rv0735/sigL |
| Rv0747/PE_PGRS10 | (cc=0.4391) | info on Rv0747/PE_PGRS10 |
| Rv1378c/- | (cc=0.4338) | info on Rv1378c/- |
| Rv1442/bisC | (cc=0.4318) | info on Rv1442/bisC |
Correlation of Rv2712c/- with Rv1688/mpg
Normalized LFCs for Rv2712c/-:
(description and provenance of datasets)
| Rv2712c/- | Rv1688/mpg | |
| Fe_supp_jason_reseq | -0.046 | 0.268 |
| low_pH_jason_reseq | 0.4 | -0.38 |
| NO_jason_reseq | 0.407 | 0.824 |
| B6_jason_reseq | -0.54 | -0.417 |
| MHCII_jason_reseq | 0.617 | 0.891 |
| Isoniazid02 | 1.487 | 2.306 |
| Rifampicin4 | 0.157 | 1.497 |
| Ethambutol3 | 0.969 | 1.71 |
| Meropenem3 | 0.424 | 0.662 |
| Vancomycin16 | 0.393 | 1.151 |
| Rv2680_day32 | -0.083 | -0.108 |
| H37Rv_KO_MarP | -0.697 | 0.975 |
| hypoxia_3wks | -0.395 | 0.694 |
| hypoxia_6wks | 0.207 | 0.29 |
| glycerol | 0.619 | 0.771 |
| cholesterol | 0.377 | -0.055 |
| AJ | 0.469 | 0.419 |
| Bibs02 | 0.499 | 0.011 |
| Bibs02c | -0.482 | -0.62 |
| BL6 | -0.561 | -1.16 |
| BL6a | -0.677 | -1.56 |
| BXD01 | 0.042 | -1.418 |
| BXD010 | -0.847 | -2.414 |
| BXD011 | -0.236 | -1.055 |
| BXD03 | -0.403 | -1.403 |
| BXD04 | -0.368 | -1.531 |
| BXD05 | -0.132 | -0.167 |
| BXD06 | -0.136 | -1.341 |
| BXD07 | -0.231 | -0.711 |
| BXD08 | -0.171 | -0.779 |
| BXD09 | -0.144 | -0.693 |
| CAST | 0.01 | -0.399 |
| CCcont | -0.553 | -1.138 |
| DS01 | 0.228 | 0.014 |
| DS02 | 0.38 | -0.331 |
| DS04 | -0.287 | 1.172 |
| DS0c | -0.321 | -0.966 |
| GP01 | -0.631 | -1.184 |
| GP02 | 0.535 | -0.207 |
| GP0c | 0.077 | -0.555 |
| NOD | -0.189 | -1.087 |
| NZO | 0.342 | 0.49 |
| PWK | 0.233 | -0.163 |
| H37Rv_KO_CtpC | -0.718 | -1.556 |
| H37Rv_KO_CtpD | 0.462 | -0.529 |
| H37Rv_KO_Rv1272 | -0.499 | -1.535 |
| H37Rv_KO_SugABC | 0.594 | -2.165 |
| H37Rv_KO_MbtN | 0.382 | 0.678 |
| Trans05 | -0.237 | -1.445 |
| macrophage_unactivated | -0.095 | -0.95 |
| IL1 | 0.154 | 0.142 |
| Rapamycin | -0.31 | -0.396 |
| Tcell | -0.225 | 0.156 |
| GMCSF | 0.378 | -0.795 |
| IFNab | 0.514 | -0.076 |
| IFNg | -0.102 | -2.037 |
| IFNg_GMCSF1 | 0.321 | -0.079 |
| Rv1432_day32 | 0.094 | 1.197 |
| Rv1565c_day32 | 0.341 | 0.949 |
| secA2_input | -0.351 | -0.729 |
| delta_Rv3594 | 0.207 | 0.552 |
| delta_Rv3717 | -0.457 | 0.652 |
| delta_Rv3811 | -0.055 | -0.451 |
| delta_Rv0954 | -0.479 | 0.372 |
| PonA1 | -0.196 | 0.085 |
| EccD1_KO | 0.526 | 0.201 |
| EspI_KO | 0.365 | 0.208 |
| PE35_KO | -0.551 | 0.248 |
| PPE68_KO | -0.378 | 0.525 |
| glycerol2 | 0.161 | -0.556 |
| lignocerate | 0.622 | -0.537 |
| oleate | 0.736 | 0.301 |
| phosphatidylcholine | 0.655 | 0.244 |
| acetate | 0.336 | -0.308 |
| glucAc | 0.187 | 1.266 |
| Rv0950ko | 0.214 | -0.808 |
| Rv1096ko | 0.042 | 0.434 |
| Rv3684ko | 0.072 | 1.113 |
| delta_otsA_trehalose | 0.576 | -1.13 |