Top 10 genes with highest correlation to Rv2685/arsB1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1785c/cyp143 | (cc=0.5095) | info on Rv1785c/cyp143 |
| Rv2605c/tesB2 | (cc=0.4683) | info on Rv2605c/tesB2 |
| Rv0216/- | (cc=0.4667) | info on Rv0216/- |
| Rv3016/lpqA | (cc=0.4651) | info on Rv3016/lpqA |
| Rv3541c/- | (cc=0.4625) | info on Rv3541c/- |
| Rv1493/mutB | (cc=0.4618) | info on Rv1493/mutB |
| Rv1561/vapC11 | (cc=0.4596) | info on Rv1561/vapC11 |
| Rv1234/- | (cc=0.4594) | info on Rv1234/- |
| Rv3614c/espD | (cc=0.4573) | info on Rv3614c/espD |
| Rv1819c/bacA | (cc=0.4558) | info on Rv1819c/bacA |
Correlation of Rv2685/arsB1 with Rv3541c/-
Normalized LFCs for Rv2685/arsB1:
(description and provenance of datasets)
| Rv2685/arsB1 | Rv3541c/- | |
| Fe_supp_jason_reseq | -0.908 | -1.716 |
| low_pH_jason_reseq | -0.405 | 2.295 |
| NO_jason_reseq | 0.27 | -2.011 |
| B6_jason_reseq | -1.456 | -1.96 |
| MHCII_jason_reseq | -1.512 | -1.726 |
| Isoniazid02 | 1.106 | 4.528 |
| Rifampicin4 | -1.083 | 0.983 |
| Ethambutol3 | 2.852 | 4.206 |
| Meropenem3 | -0.389 | 0.335 |
| Vancomycin16 | -0.061 | 0.854 |
| Rv2680_day32 | 0.863 | -0.642 |
| H37Rv_KO_MarP | 0.662 | -0.546 |
| hypoxia_3wks | -0.55 | 0.77 |
| hypoxia_6wks | 0.0 | 0.495 |
| glycerol | -0.777 | -0.231 |
| cholesterol | -0.253 | -1.612 |
| AJ | -0.97 | -2.582 |
| Bibs02 | -1.144 | -2.035 |
| Bibs02c | -0.024 | -2.328 |
| BL6 | -0.074 | -1.392 |
| BL6a | 0.154 | -2.007 |
| BXD01 | -0.358 | -1.449 |
| BXD010 | 0.241 | -1.425 |
| BXD011 | 0.277 | -0.711 |
| BXD03 | 0.147 | -1.505 |
| BXD04 | 0.303 | -1.037 |
| BXD05 | 0.837 | -1.364 |
| BXD06 | 0.351 | -1.485 |
| BXD07 | -0.048 | -1.541 |
| BXD08 | 0.638 | -1.348 |
| BXD09 | -0.066 | -1.424 |
| CAST | -0.28 | -2.563 |
| CCcont | -0.344 | -1.662 |
| DS01 | -1.112 | -2.628 |
| DS02 | -2.045 | -2.204 |
| DS04 | 0.902 | -2.159 |
| DS0c | -1.268 | -2.413 |
| GP01 | 1.047 | -1.099 |
| GP02 | 0.074 | -0.926 |
| GP0c | 0.624 | -1.447 |
| NOD | -0.159 | -2.499 |
| NZO | -1.377 | -2.219 |
| PWK | -0.755 | -2.183 |
| H37Rv_KO_CtpC | 0.731 | -1.808 |
| H37Rv_KO_CtpD | 0.42 | -1.284 |
| H37Rv_KO_Rv1272 | 0.656 | 0.05 |
| H37Rv_KO_SugABC | -0.365 | -1.004 |
| H37Rv_KO_MbtN | -0.759 | -1.147 |
| Trans05 | 1.307 | -1.454 |
| macrophage_unactivated | -0.051 | 0.193 |
| IL1 | 0.54 | 0.181 |
| Rapamycin | 1.504 | 0.0 |
| Tcell | 0.688 | -2.333 |
| GMCSF | 1.413 | -0.169 |
| IFNab | 0.55 | 1.01 |
| IFNg | 1.43 | 1.152 |
| IFNg_GMCSF1 | 0.918 | -1.37 |
| Rv1432_day32 | 0.031 | 0.0 |
| Rv1565c_day32 | -0.281 | 0.0 |
| secA2_input | -0.441 | -0.167 |
| delta_Rv3594 | 0.219 | 1.455 |
| delta_Rv3717 | 0.106 | 0.853 |
| delta_Rv3811 | 0.584 | 0.721 |
| delta_Rv0954 | 1.039 | 1.163 |
| PonA1 | 1.065 | 2.281 |
| EccD1_KO | 0.572 | -0.243 |
| EspI_KO | 0.781 | -0.667 |
| PE35_KO | 0.592 | 1.263 |
| PPE68_KO | 1.577 | 0.442 |
| glycerol2 | -0.071 | -1.401 |
| lignocerate | 0.015 | -1.218 |
| oleate | 0.474 | -1.418 |
| phosphatidylcholine | 0.153 | -1.401 |
| acetate | -0.963 | -1.662 |
| glucAc | -0.618 | -1.034 |
| Rv0950ko | -0.543 | -0.154 |
| Rv1096ko | -0.338 | 0.941 |
| Rv3684ko | 0.196 | 1.277 |
| delta_otsA_trehalose | 3.447 | 1.032 |