Top 10 genes with highest correlation to Rv2684/arsA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0554/bpoC | (cc=0.6502) | info on Rv0554/bpoC |
| Rv2683/- | (cc=0.608) | info on Rv2683/- |
| Rv2782c/pepR | (cc=0.5982) | info on Rv2782c/pepR |
| Rv1626/- | (cc=0.5716) | info on Rv1626/- |
| Rv3220c/- | (cc=0.5617) | info on Rv3220c/- |
| Rv2381c/mbtD | (cc=0.5392) | info on Rv2381c/mbtD |
| Rv0798c/cfp29 | (cc=0.5226) | info on Rv0798c/cfp29 |
| Rv1359/- | (cc=0.4893) | info on Rv1359/- |
| Rv1345/mbtM | (cc=0.4425) | info on Rv1345/mbtM |
| Rv2334/cysK1 | (cc=0.44) | info on Rv2334/cysK1 |
Correlation of Rv2684/arsA with Rv2683/-
Normalized LFCs for Rv2684/arsA:
(description and provenance of datasets)
| Rv2684/arsA | Rv2683/- | |
| Fe_supp_jason_reseq | 0.0 | 0.644 |
| low_pH_jason_reseq | 2.237 | 1.859 |
| NO_jason_reseq | 0.877 | 0.184 |
| B6_jason_reseq | 0.634 | 1.008 |
| MHCII_jason_reseq | -1.325 | -0.926 |
| Isoniazid02 | -0.116 | 0.076 |
| Rifampicin4 | 0.303 | -0.092 |
| Ethambutol3 | -0.088 | 0.063 |
| Meropenem3 | -0.038 | 1.222 |
| Vancomycin16 | 0.22 | 0.255 |
| Rv2680_day32 | 0.816 | 0.618 |
| H37Rv_KO_MarP | -1.139 | -0.49 |
| hypoxia_3wks | -3.585 | -1.655 |
| hypoxia_6wks | -2.451 | -0.733 |
| glycerol | -1.224 | -0.688 |
| cholesterol | -3.437 | -0.305 |
| AJ | -0.842 | -1.309 |
| Bibs02 | -1.592 | -0.6 |
| Bibs02c | -1.446 | -0.74 |
| BL6 | -0.167 | 0.381 |
| BL6a | -0.687 | 0.55 |
| BXD01 | 0.411 | 1.41 |
| BXD010 | -0.022 | 1.21 |
| BXD011 | 0.195 | 1.792 |
| BXD03 | -0.016 | 1.022 |
| BXD04 | 0.762 | 1.699 |
| BXD05 | -0.136 | 1.385 |
| BXD06 | 0.55 | 1.319 |
| BXD07 | -0.024 | 1.064 |
| BXD08 | -0.451 | 1.166 |
| BXD09 | 0.334 | 1.447 |
| CAST | -0.292 | -0.265 |
| CCcont | -0.161 | 0.582 |
| DS01 | -1.684 | -1.088 |
| DS02 | 0.049 | -0.206 |
| DS04 | -2.079 | -0.409 |
| DS0c | -0.478 | -2.23 |
| GP01 | -1.98 | -1.143 |
| GP02 | -2.124 | -0.243 |
| GP0c | -3.407 | -1.159 |
| NOD | -0.48 | -0.236 |
| NZO | -0.227 | 0.675 |
| PWK | -1.209 | -0.877 |
| H37Rv_KO_CtpC | -1.819 | 0.298 |
| H37Rv_KO_CtpD | -0.491 | 0.834 |
| H37Rv_KO_Rv1272 | -1.627 | 0.362 |
| H37Rv_KO_SugABC | -2.067 | 0.458 |
| H37Rv_KO_MbtN | -2.194 | -0.775 |
| Trans05 | -0.413 | 0.416 |
| macrophage_unactivated | -0.297 | -0.423 |
| IL1 | -1.43 | -0.964 |
| Rapamycin | -1.228 | -0.865 |
| Tcell | 1.857 | 1.02 |
| GMCSF | -1.88 | -1.138 |
| IFNab | -2.228 | -0.562 |
| IFNg | -1.646 | -1.069 |
| IFNg_GMCSF1 | -1.863 | -1.712 |
| Rv1432_day32 | -0.971 | -0.953 |
| Rv1565c_day32 | 0.207 | 0.096 |
| secA2_input | -0.808 | -0.647 |
| delta_Rv3594 | -2.229 | -0.569 |
| delta_Rv3717 | -2.517 | -0.356 |
| delta_Rv3811 | -2.477 | -0.824 |
| delta_Rv0954 | -1.507 | -0.366 |
| PonA1 | -0.386 | -0.806 |
| EccD1_KO | 0.845 | -0.112 |
| EspI_KO | 0.776 | -0.228 |
| PE35_KO | 2.158 | 0.875 |
| PPE68_KO | 1.68 | 0.374 |
| glycerol2 | -0.509 | -0.981 |
| lignocerate | 0.312 | -0.647 |
| oleate | -0.306 | 0.393 |
| phosphatidylcholine | -0.146 | -0.161 |
| acetate | 0.535 | -0.294 |
| glucAc | 0.46 | -1.034 |
| Rv0950ko | -0.826 | -0.223 |
| Rv1096ko | -0.268 | -0.712 |
| Rv3684ko | 0.845 | 1.683 |
| delta_otsA_trehalose | 0.098 | 0.183 |