Top 10 genes with highest correlation to Rv2671/ribD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2728c/- | (cc=0.6129) | info on Rv2728c/- |
| Rv2141c/- | (cc=0.5007) | info on Rv2141c/- |
| Rv2047c/- | (cc=0.4952) | info on Rv2047c/- |
| Rv0650/- | (cc=0.4936) | info on Rv0650/- |
| Rv1069c/- | (cc=0.4901) | info on Rv1069c/- |
| Rv0249c/- | (cc=0.4633) | info on Rv0249c/- |
| Rv1070c/echA8 | (cc=0.462) | info on Rv1070c/echA8 |
| Rv3535c/hsaG | (cc=0.4609) | info on Rv3535c/hsaG |
| Rv0450c/mmpL4 | (cc=0.46) | info on Rv0450c/mmpL4 |
| Rv2475c/- | (cc=0.4597) | info on Rv2475c/- |
Correlation of Rv2671/ribD with Rv1070c/echA8
Normalized LFCs for Rv2671/ribD:
(description and provenance of datasets)
| Rv2671/ribD | Rv1070c/echA8 | |
| Fe_supp_jason_reseq | -0.797 | 0.044 |
| low_pH_jason_reseq | -0.032 | -1.447 |
| NO_jason_reseq | -2.701 | -2.363 |
| B6_jason_reseq | -0.623 | -0.763 |
| MHCII_jason_reseq | -1.191 | -0.657 |
| Isoniazid02 | 0.162 | 0.955 |
| Rifampicin4 | 0.452 | 1.156 |
| Ethambutol3 | 0.565 | 5.307 |
| Meropenem3 | 1.182 | 0.067 |
| Vancomycin16 | 0.568 | 1.772 |
| Rv2680_day32 | -1.786 | -1.231 |
| H37Rv_KO_MarP | 0.419 | -0.203 |
| hypoxia_3wks | -0.726 | -3.856 |
| hypoxia_6wks | -2.24 | -3.061 |
| glycerol | 0.284 | -0.493 |
| cholesterol | 0.246 | 0.361 |
| AJ | -0.879 | -0.598 |
| Bibs02 | 1.098 | 0.107 |
| Bibs02c | -0.976 | -0.982 |
| BL6 | 0.256 | -1.623 |
| BL6a | -1.003 | -2.381 |
| BXD01 | -0.77 | -3.234 |
| BXD010 | -0.72 | -2.02 |
| BXD011 | -0.81 | -3.162 |
| BXD03 | -0.741 | -2.674 |
| BXD04 | -1.037 | -1.65 |
| BXD05 | -1.376 | -2.155 |
| BXD06 | -0.474 | -2.347 |
| BXD07 | -0.701 | -2.454 |
| BXD08 | -0.141 | -1.678 |
| BXD09 | -0.916 | -2.661 |
| CAST | -0.956 | -1.416 |
| CCcont | 0.166 | -1.565 |
| DS01 | 0.152 | -0.241 |
| DS02 | 1.375 | 0.425 |
| DS04 | -0.689 | 0.18 |
| DS0c | 0.545 | -0.438 |
| GP01 | -0.077 | -2.249 |
| GP02 | 0.181 | -2.219 |
| GP0c | 0.886 | -1.975 |
| NOD | -0.962 | -1.811 |
| NZO | -0.211 | -1.913 |
| PWK | -0.719 | -0.986 |
| H37Rv_KO_CtpC | -1.137 | -1.22 |
| H37Rv_KO_CtpD | -0.95 | -2.977 |
| H37Rv_KO_Rv1272 | 0.505 | -2.365 |
| H37Rv_KO_SugABC | 0.041 | -1.687 |
| H37Rv_KO_MbtN | -1.341 | -2.192 |
| Trans05 | 0.451 | -1.637 |
| macrophage_unactivated | -0.862 | -2.898 |
| IL1 | 0.638 | -4.034 |
| Rapamycin | 0.39 | -1.706 |
| Tcell | 0.0 | -3.483 |
| GMCSF | -1.17 | -1.991 |
| IFNab | 0.692 | -2.279 |
| IFNg | -0.839 | -4.191 |
| IFNg_GMCSF1 | -0.858 | -3.249 |
| Rv1432_day32 | -1.272 | -0.404 |
| Rv1565c_day32 | -1.076 | -1.316 |
| secA2_input | 1.058 | -0.712 |
| delta_Rv3594 | 0.694 | 0.315 |
| delta_Rv3717 | -0.36 | -0.795 |
| delta_Rv3811 | 0.225 | -0.913 |
| delta_Rv0954 | 0.324 | -0.19 |
| PonA1 | 0.066 | 0.446 |
| EccD1_KO | -0.181 | 1.25 |
| EspI_KO | 0.183 | 1.192 |
| PE35_KO | -0.16 | 0.858 |
| PPE68_KO | -0.877 | 1.069 |
| glycerol2 | 0.408 | 0.761 |
| lignocerate | 0.749 | 0.994 |
| oleate | 0.829 | 0.737 |
| phosphatidylcholine | 0.56 | 0.57 |
| acetate | 0.484 | 0.603 |
| glucAc | 0.507 | 1.012 |
| Rv0950ko | 0.528 | 0.543 |
| Rv1096ko | 0.856 | 1.113 |
| Rv3684ko | 0.488 | 0.177 |
| delta_otsA_trehalose | -0.545 | -0.229 |