Top 10 genes with highest correlation to Rv2671/ribD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2728c/- | (cc=0.6129) | info on Rv2728c/- |
| Rv2141c/- | (cc=0.5007) | info on Rv2141c/- |
| Rv2047c/- | (cc=0.4952) | info on Rv2047c/- |
| Rv0650/- | (cc=0.4936) | info on Rv0650/- |
| Rv1069c/- | (cc=0.4901) | info on Rv1069c/- |
| Rv0249c/- | (cc=0.4633) | info on Rv0249c/- |
| Rv1070c/echA8 | (cc=0.462) | info on Rv1070c/echA8 |
| Rv3535c/hsaG | (cc=0.4609) | info on Rv3535c/hsaG |
| Rv0450c/mmpL4 | (cc=0.46) | info on Rv0450c/mmpL4 |
| Rv2475c/- | (cc=0.4597) | info on Rv2475c/- |
Correlation of Rv2671/ribD with Rv2728c/-
Normalized LFCs for Rv2671/ribD:
(description and provenance of datasets)
| Rv2671/ribD | Rv2728c/- | |
| Fe_supp_jason_reseq | -0.797 | 0.338 |
| low_pH_jason_reseq | -0.032 | -0.614 |
| NO_jason_reseq | -2.701 | -4.253 |
| B6_jason_reseq | -0.623 | -0.245 |
| MHCII_jason_reseq | -1.191 | -0.317 |
| Isoniazid02 | 0.162 | 0.226 |
| Rifampicin4 | 0.452 | 1.378 |
| Ethambutol3 | 0.565 | 1.094 |
| Meropenem3 | 1.182 | 0.234 |
| Vancomycin16 | 0.568 | 0.878 |
| Rv2680_day32 | -1.786 | -1.34 |
| H37Rv_KO_MarP | 0.419 | 0.708 |
| hypoxia_3wks | -0.726 | -0.833 |
| hypoxia_6wks | -2.24 | -1.815 |
| glycerol | 0.284 | 1.656 |
| cholesterol | 0.246 | 0.552 |
| AJ | -0.879 | -1.405 |
| Bibs02 | 1.098 | -0.14 |
| Bibs02c | -0.976 | 0.015 |
| BL6 | 0.256 | -1.162 |
| BL6a | -1.003 | -0.476 |
| BXD01 | -0.77 | -0.642 |
| BXD010 | -0.72 | -1.285 |
| BXD011 | -0.81 | -1.01 |
| BXD03 | -0.741 | 0.049 |
| BXD04 | -1.037 | 0.027 |
| BXD05 | -1.376 | -0.275 |
| BXD06 | -0.474 | -0.674 |
| BXD07 | -0.701 | -0.572 |
| BXD08 | -0.141 | 0.201 |
| BXD09 | -0.916 | -0.596 |
| CAST | -0.956 | -0.597 |
| CCcont | 0.166 | -0.359 |
| DS01 | 0.152 | 1.343 |
| DS02 | 1.375 | 1.246 |
| DS04 | -0.689 | 0.112 |
| DS0c | 0.545 | 0.837 |
| GP01 | -0.077 | 0.13 |
| GP02 | 0.181 | 1.636 |
| GP0c | 0.886 | -0.164 |
| NOD | -0.962 | -1.16 |
| NZO | -0.211 | -0.536 |
| PWK | -0.719 | -0.789 |
| H37Rv_KO_CtpC | -1.137 | -0.361 |
| H37Rv_KO_CtpD | -0.95 | -1.771 |
| H37Rv_KO_Rv1272 | 0.505 | -0.263 |
| H37Rv_KO_SugABC | 0.041 | -0.266 |
| H37Rv_KO_MbtN | -1.341 | -0.105 |
| Trans05 | 0.451 | -0.675 |
| macrophage_unactivated | -0.862 | -0.89 |
| IL1 | 0.638 | -0.056 |
| Rapamycin | 0.39 | 0.172 |
| Tcell | 0.0 | -1.033 |
| GMCSF | -1.17 | 0.098 |
| IFNab | 0.692 | 0.085 |
| IFNg | -0.839 | -0.604 |
| IFNg_GMCSF1 | -0.858 | -1.147 |
| Rv1432_day32 | -1.272 | -0.411 |
| Rv1565c_day32 | -1.076 | -1.788 |
| secA2_input | 1.058 | -0.435 |
| delta_Rv3594 | 0.694 | 0.528 |
| delta_Rv3717 | -0.36 | -0.417 |
| delta_Rv3811 | 0.225 | 0.265 |
| delta_Rv0954 | 0.324 | 0.597 |
| PonA1 | 0.066 | 0.747 |
| EccD1_KO | -0.181 | 0.819 |
| EspI_KO | 0.183 | 0.596 |
| PE35_KO | -0.16 | 0.925 |
| PPE68_KO | -0.877 | 0.765 |
| glycerol2 | 0.408 | -0.115 |
| lignocerate | 0.749 | 0.147 |
| oleate | 0.829 | -0.05 |
| phosphatidylcholine | 0.56 | -0.115 |
| acetate | 0.484 | 0.801 |
| glucAc | 0.507 | -0.098 |
| Rv0950ko | 0.528 | 1.004 |
| Rv1096ko | 0.856 | 0.0 |
| Rv3684ko | 0.488 | -0.485 |
| delta_otsA_trehalose | -0.545 | -0.702 |