Top 10 genes with highest correlation to Rv2669/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0228/- | (cc=0.7037) | info on Rv0228/- |
| Rv0887c/- | (cc=0.6663) | info on Rv0887c/- |
| Rv1180/pks3 | (cc=0.6576) | info on Rv1180/pks3 |
| Rv3354/- | (cc=0.6571) | info on Rv3354/- |
| Rv2499c/- | (cc=0.6432) | info on Rv2499c/- |
| Rv3607c/folB | (cc=0.64) | info on Rv3607c/folB |
| Rv1734c/- | (cc=0.6349) | info on Rv1734c/- |
| Rv0850/- | (cc=0.6315) | info on Rv0850/- |
| Rv1160/mutT2 | (cc=0.6195) | info on Rv1160/mutT2 |
| Rv0914c/- | (cc=0.6156) | info on Rv0914c/- |
Correlation of Rv2669/- with Rv1160/mutT2
Normalized LFCs for Rv2669/-:
(description and provenance of datasets)
| Rv2669/- | Rv1160/mutT2 | |
| Fe_supp_jason_reseq | -0.069 | 0.796 |
| low_pH_jason_reseq | -1.332 | 1.783 |
| NO_jason_reseq | -1.205 | -1.362 |
| B6_jason_reseq | 3.037 | 3.11 |
| MHCII_jason_reseq | 2.498 | 1.161 |
| Isoniazid02 | 0.706 | 0.732 |
| Rifampicin4 | 0.49 | 0.634 |
| Ethambutol3 | -0.122 | -0.505 |
| Meropenem3 | 0.0 | 0.266 |
| Vancomycin16 | 0.698 | 0.34 |
| Rv2680_day32 | -0.875 | 2.399 |
| H37Rv_KO_MarP | 2.138 | 0.459 |
| hypoxia_3wks | -0.961 | -1.475 |
| hypoxia_6wks | 0.309 | -1.428 |
| glycerol | 1.34 | 1.011 |
| cholesterol | 1.133 | -0.301 |
| AJ | -0.398 | -0.143 |
| Bibs02 | 0.126 | 2.236 |
| Bibs02c | 0.191 | 2.039 |
| BL6 | 0.227 | -1.115 |
| BL6a | -1.116 | 0.329 |
| BXD01 | -1.807 | -0.795 |
| BXD010 | -2.339 | -2.719 |
| BXD011 | -2.809 | -1.161 |
| BXD03 | -3.074 | 1.517 |
| BXD04 | -0.599 | -0.961 |
| BXD05 | -2.654 | -1.403 |
| BXD06 | -2.704 | -1.163 |
| BXD07 | -3.148 | -2.94 |
| BXD08 | -1.028 | -1.95 |
| BXD09 | -1.753 | -2.584 |
| CAST | -0.27 | 0.799 |
| CCcont | -1.547 | -1.108 |
| DS01 | 1.702 | 0.157 |
| DS02 | 1.15 | -0.362 |
| DS04 | 1.428 | -0.343 |
| DS0c | 0.506 | 0.328 |
| GP01 | -2.315 | 0.435 |
| GP02 | -0.686 | -0.447 |
| GP0c | -0.337 | 0.271 |
| NOD | 2.193 | 1.32 |
| NZO | 0.0 | 0.345 |
| PWK | -0.74 | 1.447 |
| H37Rv_KO_CtpC | -0.85 | -1.121 |
| H37Rv_KO_CtpD | -3.068 | 0.124 |
| H37Rv_KO_Rv1272 | -3.802 | -2.821 |
| H37Rv_KO_SugABC | 0.268 | 0.972 |
| H37Rv_KO_MbtN | -2.497 | -1.948 |
| Trans05 | -3.393 | -2.469 |
| macrophage_unactivated | -1.31 | -4.135 |
| IL1 | -3.921 | -2.325 |
| Rapamycin | -4.057 | -6.0 |
| Tcell | -1.678 | -4.871 |
| GMCSF | -1.497 | -5.405 |
| IFNab | -2.606 | -5.393 |
| IFNg | -4.049 | -4.559 |
| IFNg_GMCSF1 | -1.012 | -3.94 |
| Rv1432_day32 | 0.0 | -0.156 |
| Rv1565c_day32 | 0.284 | 0.829 |
| secA2_input | 0.302 | -1.257 |
| delta_Rv3594 | 1.741 | 3.218 |
| delta_Rv3717 | 1.995 | 1.803 |
| delta_Rv3811 | 1.787 | 2.947 |
| delta_Rv0954 | -0.096 | 3.865 |
| PonA1 | 0.372 | 2.68 |
| EccD1_KO | -0.181 | -2.052 |
| EspI_KO | -1.708 | -2.436 |
| PE35_KO | 0.155 | -1.24 |
| PPE68_KO | -0.176 | -1.776 |
| glycerol2 | 1.014 | 3.041 |
| lignocerate | 0.216 | 3.54 |
| oleate | 0.366 | 0.373 |
| phosphatidylcholine | 0.667 | 2.749 |
| acetate | -0.336 | 4.0 |
| glucAc | 0.239 | 3.778 |
| Rv0950ko | 0.229 | -0.908 |
| Rv1096ko | 0.947 | -0.063 |
| Rv3684ko | 2.204 | 1.985 |
| delta_otsA_trehalose | 0.075 | -0.438 |