Top 10 genes with highest correlation to Rv2669/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0228/- | (cc=0.7037) | info on Rv0228/- |
| Rv0887c/- | (cc=0.6663) | info on Rv0887c/- |
| Rv1180/pks3 | (cc=0.6576) | info on Rv1180/pks3 |
| Rv3354/- | (cc=0.6571) | info on Rv3354/- |
| Rv2499c/- | (cc=0.6432) | info on Rv2499c/- |
| Rv3607c/folB | (cc=0.64) | info on Rv3607c/folB |
| Rv1734c/- | (cc=0.6349) | info on Rv1734c/- |
| Rv0850/- | (cc=0.6315) | info on Rv0850/- |
| Rv1160/mutT2 | (cc=0.6195) | info on Rv1160/mutT2 |
| Rv0914c/- | (cc=0.6156) | info on Rv0914c/- |
Correlation of Rv2669/- with Rv0914c/-
Normalized LFCs for Rv2669/-:
(description and provenance of datasets)
| Rv2669/- | Rv0914c/- | |
| Fe_supp_jason_reseq | -0.069 | 0.264 |
| low_pH_jason_reseq | -1.332 | 0.53 |
| NO_jason_reseq | -1.205 | 0.289 |
| B6_jason_reseq | 3.037 | 0.9 |
| MHCII_jason_reseq | 2.498 | 1.272 |
| Isoniazid02 | 0.706 | -0.453 |
| Rifampicin4 | 0.49 | 0.157 |
| Ethambutol3 | -0.122 | -0.378 |
| Meropenem3 | 0.0 | 0.2 |
| Vancomycin16 | 0.698 | 0.478 |
| Rv2680_day32 | -0.875 | -1.695 |
| H37Rv_KO_MarP | 2.138 | 0.509 |
| hypoxia_3wks | -0.961 | 0.319 |
| hypoxia_6wks | 0.309 | -0.065 |
| glycerol | 1.34 | -0.913 |
| cholesterol | 1.133 | -0.512 |
| AJ | -0.398 | 0.089 |
| Bibs02 | 0.126 | -0.827 |
| Bibs02c | 0.191 | -0.594 |
| BL6 | 0.227 | -1.486 |
| BL6a | -1.116 | -1.083 |
| BXD01 | -1.807 | -1.172 |
| BXD010 | -2.339 | -0.826 |
| BXD011 | -2.809 | -1.499 |
| BXD03 | -3.074 | -1.526 |
| BXD04 | -0.599 | -1.597 |
| BXD05 | -2.654 | -0.898 |
| BXD06 | -2.704 | -1.799 |
| BXD07 | -3.148 | -1.234 |
| BXD08 | -1.028 | -0.887 |
| BXD09 | -1.753 | -1.291 |
| CAST | -0.27 | 0.315 |
| CCcont | -1.547 | -1.536 |
| DS01 | 1.702 | 0.811 |
| DS02 | 1.15 | 0.625 |
| DS04 | 1.428 | 0.682 |
| DS0c | 0.506 | 0.108 |
| GP01 | -2.315 | -0.3 |
| GP02 | -0.686 | -1.785 |
| GP0c | -0.337 | -0.838 |
| NOD | 2.193 | 0.291 |
| NZO | 0.0 | -0.097 |
| PWK | -0.74 | 0.091 |
| H37Rv_KO_CtpC | -0.85 | -0.724 |
| H37Rv_KO_CtpD | -3.068 | -2.503 |
| H37Rv_KO_Rv1272 | -3.802 | -0.961 |
| H37Rv_KO_SugABC | 0.268 | -0.286 |
| H37Rv_KO_MbtN | -2.497 | -1.36 |
| Trans05 | -3.393 | 0.021 |
| macrophage_unactivated | -1.31 | -0.556 |
| IL1 | -3.921 | -0.329 |
| Rapamycin | -4.057 | -0.58 |
| Tcell | -1.678 | -1.03 |
| GMCSF | -1.497 | -0.993 |
| IFNab | -2.606 | -1.091 |
| IFNg | -4.049 | -0.73 |
| IFNg_GMCSF1 | -1.012 | 0.182 |
| Rv1432_day32 | 0.0 | 0.242 |
| Rv1565c_day32 | 0.284 | 0.899 |
| secA2_input | 0.302 | 0.485 |
| delta_Rv3594 | 1.741 | 0.528 |
| delta_Rv3717 | 1.995 | 0.064 |
| delta_Rv3811 | 1.787 | 0.238 |
| delta_Rv0954 | -0.096 | 0.393 |
| PonA1 | 0.372 | 0.65 |
| EccD1_KO | -0.181 | 0.273 |
| EspI_KO | -1.708 | 0.399 |
| PE35_KO | 0.155 | -0.219 |
| PPE68_KO | -0.176 | 0.038 |
| glycerol2 | 1.014 | -0.371 |
| lignocerate | 0.216 | 0.089 |
| oleate | 0.366 | -0.647 |
| phosphatidylcholine | 0.667 | -0.434 |
| acetate | -0.336 | -0.047 |
| glucAc | 0.239 | 0.582 |
| Rv0950ko | 0.229 | 0.522 |
| Rv1096ko | 0.947 | 0.814 |
| Rv3684ko | 2.204 | 1.497 |
| delta_otsA_trehalose | 0.075 | 0.0 |