Top 10 genes with highest correlation to Rv2669/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0228/- | (cc=0.7037) | info on Rv0228/- |
| Rv0887c/- | (cc=0.6663) | info on Rv0887c/- |
| Rv1180/pks3 | (cc=0.6576) | info on Rv1180/pks3 |
| Rv3354/- | (cc=0.6571) | info on Rv3354/- |
| Rv2499c/- | (cc=0.6432) | info on Rv2499c/- |
| Rv3607c/folB | (cc=0.64) | info on Rv3607c/folB |
| Rv1734c/- | (cc=0.6349) | info on Rv1734c/- |
| Rv0850/- | (cc=0.6315) | info on Rv0850/- |
| Rv1160/mutT2 | (cc=0.6195) | info on Rv1160/mutT2 |
| Rv0914c/- | (cc=0.6156) | info on Rv0914c/- |
Correlation of Rv2669/- with Rv0228/-
Normalized LFCs for Rv2669/-:
(description and provenance of datasets)
| Rv2669/- | Rv0228/- | |
| Fe_supp_jason_reseq | -0.069 | 1.07 |
| low_pH_jason_reseq | -1.332 | 0.0 |
| NO_jason_reseq | -1.205 | 0.0 |
| B6_jason_reseq | 3.037 | 1.759 |
| MHCII_jason_reseq | 2.498 | 0.37 |
| Isoniazid02 | 0.706 | -0.167 |
| Rifampicin4 | 0.49 | 0.558 |
| Ethambutol3 | -0.122 | -0.14 |
| Meropenem3 | 0.0 | 0.128 |
| Vancomycin16 | 0.698 | 0.796 |
| Rv2680_day32 | -0.875 | 0.0 |
| H37Rv_KO_MarP | 2.138 | -0.684 |
| hypoxia_3wks | -0.961 | 0.678 |
| hypoxia_6wks | 0.309 | -0.626 |
| glycerol | 1.34 | 0.585 |
| cholesterol | 1.133 | 0.915 |
| AJ | -0.398 | 0.05 |
| Bibs02 | 0.126 | 0.56 |
| Bibs02c | 0.191 | -1.66 |
| BL6 | 0.227 | -2.023 |
| BL6a | -1.116 | -2.66 |
| BXD01 | -1.807 | -2.107 |
| BXD010 | -2.339 | -2.072 |
| BXD011 | -2.809 | -2.06 |
| BXD03 | -3.074 | -2.187 |
| BXD04 | -0.599 | -2.0 |
| BXD05 | -2.654 | -2.177 |
| BXD06 | -2.704 | -2.159 |
| BXD07 | -3.148 | -2.24 |
| BXD08 | -1.028 | -2.151 |
| BXD09 | -1.753 | -2.273 |
| CAST | -0.27 | -0.389 |
| CCcont | -1.547 | -2.131 |
| DS01 | 1.702 | -0.727 |
| DS02 | 1.15 | -1.942 |
| DS04 | 1.428 | 0.779 |
| DS0c | 0.506 | -1.431 |
| GP01 | -2.315 | -1.597 |
| GP02 | -0.686 | -1.346 |
| GP0c | -0.337 | -2.103 |
| NOD | 2.193 | -0.83 |
| NZO | 0.0 | -0.285 |
| PWK | -0.74 | 0.168 |
| H37Rv_KO_CtpC | -0.85 | -2.628 |
| H37Rv_KO_CtpD | -3.068 | -1.922 |
| H37Rv_KO_Rv1272 | -3.802 | -2.281 |
| H37Rv_KO_SugABC | 0.268 | -1.503 |
| H37Rv_KO_MbtN | -2.497 | -1.667 |
| Trans05 | -3.393 | -1.983 |
| macrophage_unactivated | -1.31 | -2.923 |
| IL1 | -3.921 | -2.747 |
| Rapamycin | -4.057 | -2.842 |
| Tcell | -1.678 | -3.017 |
| GMCSF | -1.497 | -2.445 |
| IFNab | -2.606 | -2.799 |
| IFNg | -4.049 | -2.475 |
| IFNg_GMCSF1 | -1.012 | -1.386 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.284 | 0.0 |
| secA2_input | 0.302 | 1.565 |
| delta_Rv3594 | 1.741 | 0.402 |
| delta_Rv3717 | 1.995 | 0.0 |
| delta_Rv3811 | 1.787 | 0.205 |
| delta_Rv0954 | -0.096 | 0.0 |
| PonA1 | 0.372 | 0.0 |
| EccD1_KO | -0.181 | -0.865 |
| EspI_KO | -1.708 | -0.359 |
| PE35_KO | 0.155 | -0.368 |
| PPE68_KO | -0.176 | -0.841 |
| glycerol2 | 1.014 | 0.0 |
| lignocerate | 0.216 | 0.591 |
| oleate | 0.366 | 0.0 |
| phosphatidylcholine | 0.667 | 0.193 |
| acetate | -0.336 | 0.0 |
| glucAc | 0.239 | 0.0 |
| Rv0950ko | 0.229 | 0.793 |
| Rv1096ko | 0.947 | 1.143 |
| Rv3684ko | 2.204 | 0.452 |
| delta_otsA_trehalose | 0.075 | 0.0 |