Top 10 genes with highest correlation to Rv2658c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2345/- | (cc=0.5726) | info on Rv2345/- |
| Rv1947/- | (cc=0.5511) | info on Rv1947/- |
| Rv1916/aceAb | (cc=0.4909) | info on Rv1916/aceAb |
| Rv2634c/PE_PGRS46 | (cc=0.4838) | info on Rv2634c/PE_PGRS46 |
| Rv3451/cut3 | (cc=0.4631) | info on Rv3451/cut3 |
| Rv2791c/- | (cc=0.4541) | info on Rv2791c/- |
| Rv0078/- | (cc=0.4515) | info on Rv0078/- |
| Rv1000c/- | (cc=0.4466) | info on Rv1000c/- |
| Rv2336/- | (cc=0.4412) | info on Rv2336/- |
| Rv2704/- | (cc=0.4381) | info on Rv2704/- |
Correlation of Rv2658c/- with Rv1916/aceAb
Normalized LFCs for Rv2658c/-:
(description and provenance of datasets)
| Rv2658c/- | Rv1916/aceAb | |
| Fe_supp_jason_reseq | 0.387 | -0.188 |
| low_pH_jason_reseq | -0.974 | -0.532 |
| NO_jason_reseq | 0.0 | 0.0 |
| B6_jason_reseq | 0.034 | 0.676 |
| MHCII_jason_reseq | 0.572 | 0.767 |
| Isoniazid02 | -0.778 | -1.4 |
| Rifampicin4 | 0.311 | 0.468 |
| Ethambutol3 | -0.143 | -1.89 |
| Meropenem3 | -1.622 | -1.194 |
| Vancomycin16 | -1.059 | -0.873 |
| Rv2680_day32 | -0.294 | -0.093 |
| H37Rv_KO_MarP | 0.78 | -0.478 |
| hypoxia_3wks | 0.279 | -0.367 |
| hypoxia_6wks | -0.186 | 0.474 |
| glycerol | 0.265 | -0.622 |
| cholesterol | 0.041 | -0.116 |
| AJ | -0.655 | -0.203 |
| Bibs02 | 0.229 | -0.381 |
| Bibs02c | 0.391 | 0.314 |
| BL6 | -0.702 | -1.125 |
| BL6a | 0.564 | -0.056 |
| BXD01 | -0.257 | -0.389 |
| BXD010 | -0.135 | -1.383 |
| BXD011 | -0.076 | -0.266 |
| BXD03 | 0.005 | -0.088 |
| BXD04 | -0.339 | -0.887 |
| BXD05 | 0.775 | -0.575 |
| BXD06 | -0.034 | -0.424 |
| BXD07 | 0.344 | -0.375 |
| BXD08 | -0.109 | -0.473 |
| BXD09 | 0.098 | -0.913 |
| CAST | 0.444 | 0.11 |
| CCcont | -0.182 | -1.499 |
| DS01 | 0.05 | 0.383 |
| DS02 | 0.307 | 0.26 |
| DS04 | -0.197 | -0.055 |
| DS0c | 0.732 | 0.442 |
| GP01 | -0.697 | -0.555 |
| GP02 | -0.467 | 0.411 |
| GP0c | -0.551 | -0.583 |
| NOD | 0.664 | 0.0 |
| NZO | 0.118 | 0.175 |
| PWK | 0.448 | 0.443 |
| H37Rv_KO_CtpC | -0.272 | -0.425 |
| H37Rv_KO_CtpD | 0.798 | 0.9 |
| H37Rv_KO_Rv1272 | 0.35 | 0.54 |
| H37Rv_KO_SugABC | 0.476 | 0.041 |
| H37Rv_KO_MbtN | 0.685 | 0.38 |
| Trans05 | 0.346 | 0.172 |
| macrophage_unactivated | 0.309 | -0.524 |
| IL1 | 0.653 | -0.839 |
| Rapamycin | 0.715 | -1.559 |
| Tcell | -0.101 | -0.44 |
| GMCSF | 0.512 | 0.75 |
| IFNab | 0.435 | -1.07 |
| IFNg | 0.446 | -0.444 |
| IFNg_GMCSF1 | 0.248 | 0.088 |
| Rv1432_day32 | 0.037 | -0.171 |
| Rv1565c_day32 | 0.125 | -0.123 |
| secA2_input | -0.254 | 0.279 |
| delta_Rv3594 | -0.052 | 0.057 |
| delta_Rv3717 | -0.551 | -0.491 |
| delta_Rv3811 | -0.425 | 0.491 |
| delta_Rv0954 | 0.133 | -0.14 |
| PonA1 | -0.97 | -0.366 |
| EccD1_KO | 0.089 | 0.122 |
| EspI_KO | 0.893 | 0.625 |
| PE35_KO | 0.939 | 1.482 |
| PPE68_KO | 0.189 | 1.187 |
| glycerol2 | -0.472 | 0.248 |
| lignocerate | -0.756 | -0.304 |
| oleate | 0.191 | 0.861 |
| phosphatidylcholine | -0.282 | 0.5 |
| acetate | -0.233 | -0.608 |
| glucAc | -0.879 | -0.965 |
| Rv0950ko | 0.027 | -0.479 |
| Rv1096ko | -0.784 | -1.556 |
| Rv3684ko | -0.802 | -1.032 |
| delta_otsA_trehalose | 1.711 | 1.49 |