Top 10 genes with highest correlation to Rv2658c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2345/- | (cc=0.5726) | info on Rv2345/- |
| Rv1947/- | (cc=0.5511) | info on Rv1947/- |
| Rv1916/aceAb | (cc=0.4909) | info on Rv1916/aceAb |
| Rv2634c/PE_PGRS46 | (cc=0.4838) | info on Rv2634c/PE_PGRS46 |
| Rv3451/cut3 | (cc=0.4631) | info on Rv3451/cut3 |
| Rv2791c/- | (cc=0.4541) | info on Rv2791c/- |
| Rv0078/- | (cc=0.4515) | info on Rv0078/- |
| Rv1000c/- | (cc=0.4466) | info on Rv1000c/- |
| Rv2336/- | (cc=0.4412) | info on Rv2336/- |
| Rv2704/- | (cc=0.4381) | info on Rv2704/- |
Correlation of Rv2658c/- with Rv0078/-
Normalized LFCs for Rv2658c/-:
(description and provenance of datasets)
| Rv2658c/- | Rv0078/- | |
| Fe_supp_jason_reseq | 0.387 | -0.23 |
| low_pH_jason_reseq | -0.974 | -0.144 |
| NO_jason_reseq | 0.0 | 0.903 |
| B6_jason_reseq | 0.034 | -1.237 |
| MHCII_jason_reseq | 0.572 | -0.301 |
| Isoniazid02 | -0.778 | -1.112 |
| Rifampicin4 | 0.311 | -0.899 |
| Ethambutol3 | -0.143 | -0.074 |
| Meropenem3 | -1.622 | -0.915 |
| Vancomycin16 | -1.059 | -0.565 |
| Rv2680_day32 | -0.294 | 0.235 |
| H37Rv_KO_MarP | 0.78 | 0.093 |
| hypoxia_3wks | 0.279 | 1.284 |
| hypoxia_6wks | -0.186 | 0.288 |
| glycerol | 0.265 | -0.521 |
| cholesterol | 0.041 | -0.789 |
| AJ | -0.655 | -0.239 |
| Bibs02 | 0.229 | -0.397 |
| Bibs02c | 0.391 | -0.54 |
| BL6 | -0.702 | -1.52 |
| BL6a | 0.564 | 0.0 |
| BXD01 | -0.257 | -0.392 |
| BXD010 | -0.135 | -0.564 |
| BXD011 | -0.076 | -0.086 |
| BXD03 | 0.005 | -0.98 |
| BXD04 | -0.339 | -0.372 |
| BXD05 | 0.775 | 0.71 |
| BXD06 | -0.034 | 0.24 |
| BXD07 | 0.344 | 0.0 |
| BXD08 | -0.109 | -0.521 |
| BXD09 | 0.098 | 0.131 |
| CAST | 0.444 | -0.692 |
| CCcont | -0.182 | -1.082 |
| DS01 | 0.05 | 0.221 |
| DS02 | 0.307 | 1.467 |
| DS04 | -0.197 | -1.405 |
| DS0c | 0.732 | 0.0 |
| GP01 | -0.697 | 0.062 |
| GP02 | -0.467 | -0.929 |
| GP0c | -0.551 | -0.231 |
| NOD | 0.664 | 1.048 |
| NZO | 0.118 | -0.98 |
| PWK | 0.448 | -0.065 |
| H37Rv_KO_CtpC | -0.272 | 0.292 |
| H37Rv_KO_CtpD | 0.798 | 2.097 |
| H37Rv_KO_Rv1272 | 0.35 | 0.998 |
| H37Rv_KO_SugABC | 0.476 | -0.067 |
| H37Rv_KO_MbtN | 0.685 | 0.677 |
| Trans05 | 0.346 | 0.161 |
| macrophage_unactivated | 0.309 | 1.042 |
| IL1 | 0.653 | 0.463 |
| Rapamycin | 0.715 | 0.126 |
| Tcell | -0.101 | 1.075 |
| GMCSF | 0.512 | -1.133 |
| IFNab | 0.435 | -0.529 |
| IFNg | 0.446 | 0.794 |
| IFNg_GMCSF1 | 0.248 | 0.606 |
| Rv1432_day32 | 0.037 | 0.454 |
| Rv1565c_day32 | 0.125 | -0.455 |
| secA2_input | -0.254 | -1.597 |
| delta_Rv3594 | -0.052 | -1.71 |
| delta_Rv3717 | -0.551 | -1.047 |
| delta_Rv3811 | -0.425 | -0.846 |
| delta_Rv0954 | 0.133 | -0.447 |
| PonA1 | -0.97 | -1.554 |
| EccD1_KO | 0.089 | -0.316 |
| EspI_KO | 0.893 | -0.493 |
| PE35_KO | 0.939 | 2.053 |
| PPE68_KO | 0.189 | 1.401 |
| glycerol2 | -0.472 | -3.723 |
| lignocerate | -0.756 | -3.328 |
| oleate | 0.191 | -2.786 |
| phosphatidylcholine | -0.282 | -2.598 |
| acetate | -0.233 | -1.386 |
| glucAc | -0.879 | -4.385 |
| Rv0950ko | 0.027 | 1.025 |
| Rv1096ko | -0.784 | 0.917 |
| Rv3684ko | -0.802 | 0.491 |
| delta_otsA_trehalose | 1.711 | 0.77 |