Top 10 genes with highest correlation to Rv2655c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv1239c/corA | (cc=0.6824) | info on Rv1239c/corA |
Rv3419c/gcp | (cc=0.6076) | info on Rv3419c/gcp |
Rv3842c/glpQ1 | (cc=0.5671) | info on Rv3842c/glpQ1 |
Rv1712/cmk | (cc=0.5487) | info on Rv1712/cmk |
Rv0668/rpoC | (cc=0.5486) | info on Rv0668/rpoC |
Rv3696c/glpK | (cc=0.5405) | info on Rv3696c/glpK |
Rv0879c/- | (cc=0.538) | info on Rv0879c/- |
Rv3449/mycP4 | (cc=0.5269) | info on Rv3449/mycP4 |
Rv0818/- | (cc=0.5231) | info on Rv0818/- |
Rv2167c/- | (cc=0.5226) | info on Rv2167c/- |
Correlation of Rv2655c/- with Rv2167c/-
Normalized LFCs for Rv2655c/-:
(description and provenance of datasets)
Rv2655c/- | Rv2167c/- | |
Fe_supp_jason_reseq | -0.665 | -0.235 |
low_pH_jason_reseq | 1.641 | -0.423 |
NO_jason_reseq | 1.717 | 0.213 |
B6_jason_reseq | 0.868 | -0.395 |
MHCII_jason_reseq | -0.526 | 0.056 |
Isoniazid02 | -0.054 | -0.17 |
Rifampicin4 | 0.065 | 0.701 |
Ethambutol3 | 1.524 | 0.447 |
Meropenem3 | 0.767 | -0.344 |
Vancomycin16 | 0.032 | -0.294 |
Rv2680_day32 | 0.131 | 0.289 |
H37Rv_KO_MarP | 0.141 | -0.196 |
hypoxia_3wks | -0.901 | 0.494 |
hypoxia_6wks | 0.409 | -0.031 |
glycerol | -0.268 | -0.611 |
cholesterol | 0.171 | 0.148 |
AJ | 0.647 | 1.501 |
Bibs02 | 0.111 | 1.264 |
Bibs02c | -0.135 | 1.763 |
BL6 | 0.28 | 0.439 |
BL6a | 0.456 | 1.217 |
BXD01 | 0.735 | 0.778 |
BXD010 | 0.791 | 0.951 |
BXD011 | 1.682 | 0.82 |
BXD03 | 0.661 | 0.844 |
BXD04 | -0.209 | 0.626 |
BXD05 | 0.748 | 1.094 |
BXD06 | 0.772 | 0.621 |
BXD07 | 1.172 | 0.892 |
BXD08 | 1.129 | 0.529 |
BXD09 | 0.781 | 0.84 |
CAST | 1.3 | 1.49 |
CCcont | -0.785 | 0.285 |
DS01 | 0.544 | 1.134 |
DS02 | 0.487 | 1.045 |
DS04 | -0.364 | 1.304 |
DS0c | -0.195 | 1.31 |
GP01 | 0.157 | 1.294 |
GP02 | 0.619 | 1.392 |
GP0c | 0.216 | 0.82 |
NOD | 1.217 | 1.424 |
NZO | 1.062 | 1.272 |
PWK | 2.322 | 1.3 |
H37Rv_KO_CtpC | 0.225 | 0.892 |
H37Rv_KO_CtpD | -0.651 | 0.867 |
H37Rv_KO_Rv1272 | 0.176 | 0.537 |
H37Rv_KO_SugABC | -0.032 | 0.886 |
H37Rv_KO_MbtN | 0.927 | 0.664 |
Trans05 | 1.608 | 0.915 |
macrophage_unactivated | -1.023 | -1.155 |
IL1 | -0.486 | -0.777 |
Rapamycin | -0.743 | -0.684 |
Tcell | -0.362 | -1.678 |
GMCSF | -0.349 | -0.396 |
IFNab | -0.732 | -1.058 |
IFNg | -0.184 | -0.657 |
IFNg_GMCSF1 | -0.217 | -0.921 |
Rv1432_day32 | -0.588 | 0.189 |
Rv1565c_day32 | -0.607 | 0.253 |
secA2_input | 1.241 | 0.188 |
delta_Rv3594 | -0.24 | -0.115 |
delta_Rv3717 | 0.247 | -0.02 |
delta_Rv3811 | 0.138 | -0.162 |
delta_Rv0954 | -0.548 | 0.344 |
PonA1 | -0.615 | -0.167 |
EccD1_KO | -0.987 | -0.053 |
EspI_KO | 0.145 | 0.97 |
PE35_KO | -0.648 | 0.7 |
PPE68_KO | 0.32 | 0.493 |
glycerol2 | -1.527 | -1.009 |
lignocerate | -1.803 | -0.837 |
oleate | -0.922 | -1.18 |
phosphatidylcholine | -1.527 | -0.919 |
acetate | -1.765 | -0.47 |
glucAc | -1.717 | -0.084 |
Rv0950ko | -0.178 | 0.042 |
Rv1096ko | -0.404 | 0.151 |
Rv3684ko | -0.193 | -0.635 |
delta_otsA_trehalose | 1.027 | 0.344 |