Top 10 genes with highest correlation to Rv2655c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1239c/corA | (cc=0.6824) | info on Rv1239c/corA |
| Rv3419c/gcp | (cc=0.6076) | info on Rv3419c/gcp |
| Rv3842c/glpQ1 | (cc=0.5671) | info on Rv3842c/glpQ1 |
| Rv1712/cmk | (cc=0.5487) | info on Rv1712/cmk |
| Rv0668/rpoC | (cc=0.5486) | info on Rv0668/rpoC |
| Rv3696c/glpK | (cc=0.5405) | info on Rv3696c/glpK |
| Rv0879c/- | (cc=0.538) | info on Rv0879c/- |
| Rv3449/mycP4 | (cc=0.5269) | info on Rv3449/mycP4 |
| Rv0818/- | (cc=0.5231) | info on Rv0818/- |
| Rv2167c/- | (cc=0.5226) | info on Rv2167c/- |
Correlation of Rv2655c/- with Rv1712/cmk
Normalized LFCs for Rv2655c/-:
(description and provenance of datasets)
| Rv2655c/- | Rv1712/cmk | |
| Fe_supp_jason_reseq | -0.665 | -0.458 |
| low_pH_jason_reseq | 1.641 | 3.63 |
| NO_jason_reseq | 1.717 | 2.625 |
| B6_jason_reseq | 0.868 | -1.263 |
| MHCII_jason_reseq | -0.526 | -0.977 |
| Isoniazid02 | -0.054 | -0.183 |
| Rifampicin4 | 0.065 | 0.0 |
| Ethambutol3 | 1.524 | 0.0 |
| Meropenem3 | 0.767 | 0.386 |
| Vancomycin16 | 0.032 | 0.0 |
| Rv2680_day32 | 0.131 | 1.501 |
| H37Rv_KO_MarP | 0.141 | -1.081 |
| hypoxia_3wks | -0.901 | -1.388 |
| hypoxia_6wks | 0.409 | -1.013 |
| glycerol | -0.268 | 0.0 |
| cholesterol | 0.171 | 0.0 |
| AJ | 0.647 | 0.0 |
| Bibs02 | 0.111 | 0.0 |
| Bibs02c | -0.135 | 0.0 |
| BL6 | 0.28 | 0.125 |
| BL6a | 0.456 | 1.217 |
| BXD01 | 0.735 | 1.953 |
| BXD010 | 0.791 | 0.352 |
| BXD011 | 1.682 | 1.322 |
| BXD03 | 0.661 | 3.024 |
| BXD04 | -0.209 | 1.42 |
| BXD05 | 0.748 | 2.566 |
| BXD06 | 0.772 | 3.239 |
| BXD07 | 1.172 | 1.073 |
| BXD08 | 1.129 | 1.891 |
| BXD09 | 0.781 | 1.798 |
| CAST | 1.3 | 0.0 |
| CCcont | -0.785 | 0.733 |
| DS01 | 0.544 | 0.0 |
| DS02 | 0.487 | 0.0 |
| DS04 | -0.364 | 0.0 |
| DS0c | -0.195 | 0.0 |
| GP01 | 0.157 | 0.0 |
| GP02 | 0.619 | 0.0 |
| GP0c | 0.216 | 0.0 |
| NOD | 1.217 | 0.0 |
| NZO | 1.062 | 0.0 |
| PWK | 2.322 | 0.0 |
| H37Rv_KO_CtpC | 0.225 | 0.162 |
| H37Rv_KO_CtpD | -0.651 | 0.127 |
| H37Rv_KO_Rv1272 | 0.176 | 0.598 |
| H37Rv_KO_SugABC | -0.032 | 0.0 |
| H37Rv_KO_MbtN | 0.927 | 1.286 |
| Trans05 | 1.608 | 1.077 |
| macrophage_unactivated | -1.023 | -1.626 |
| IL1 | -0.486 | -0.955 |
| Rapamycin | -0.743 | 0.0 |
| Tcell | -0.362 | -0.495 |
| GMCSF | -0.349 | 1.001 |
| IFNab | -0.732 | 0.212 |
| IFNg | -0.184 | -1.376 |
| IFNg_GMCSF1 | -0.217 | 0.826 |
| Rv1432_day32 | -0.588 | 0.0 |
| Rv1565c_day32 | -0.607 | -0.766 |
| secA2_input | 1.241 | 1.86 |
| delta_Rv3594 | -0.24 | 0.268 |
| delta_Rv3717 | 0.247 | 0.677 |
| delta_Rv3811 | 0.138 | -0.07 |
| delta_Rv0954 | -0.548 | -2.109 |
| PonA1 | -0.615 | -1.324 |
| EccD1_KO | -0.987 | 0.0 |
| EspI_KO | 0.145 | -1.668 |
| PE35_KO | -0.648 | -0.239 |
| PPE68_KO | 0.32 | 0.0 |
| glycerol2 | -1.527 | -1.188 |
| lignocerate | -1.803 | -1.425 |
| oleate | -0.922 | -0.614 |
| phosphatidylcholine | -1.527 | -1.639 |
| acetate | -1.765 | -0.603 |
| glucAc | -1.717 | -0.78 |
| Rv0950ko | -0.178 | -0.793 |
| Rv1096ko | -0.404 | 2.223 |
| Rv3684ko | -0.193 | 0.255 |
| delta_otsA_trehalose | 1.027 | 0.366 |