Top 10 genes with highest correlation to Rv2655c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1239c/corA | (cc=0.6824) | info on Rv1239c/corA |
| Rv3419c/gcp | (cc=0.6076) | info on Rv3419c/gcp |
| Rv3842c/glpQ1 | (cc=0.5671) | info on Rv3842c/glpQ1 |
| Rv1712/cmk | (cc=0.5487) | info on Rv1712/cmk |
| Rv0668/rpoC | (cc=0.5486) | info on Rv0668/rpoC |
| Rv3696c/glpK | (cc=0.5405) | info on Rv3696c/glpK |
| Rv0879c/- | (cc=0.538) | info on Rv0879c/- |
| Rv3449/mycP4 | (cc=0.5269) | info on Rv3449/mycP4 |
| Rv0818/- | (cc=0.5231) | info on Rv0818/- |
| Rv2167c/- | (cc=0.5226) | info on Rv2167c/- |
Correlation of Rv2655c/- with Rv1239c/corA
Normalized LFCs for Rv2655c/-:
(description and provenance of datasets)
| Rv2655c/- | Rv1239c/corA | |
| Fe_supp_jason_reseq | -0.665 | -0.69 |
| low_pH_jason_reseq | 1.641 | 1.064 |
| NO_jason_reseq | 1.717 | 1.433 |
| B6_jason_reseq | 0.868 | 0.087 |
| MHCII_jason_reseq | -0.526 | -1.266 |
| Isoniazid02 | -0.054 | 0.036 |
| Rifampicin4 | 0.065 | -0.625 |
| Ethambutol3 | 1.524 | 0.0 |
| Meropenem3 | 0.767 | -1.067 |
| Vancomycin16 | 0.032 | -0.459 |
| Rv2680_day32 | 0.131 | 0.318 |
| H37Rv_KO_MarP | 0.141 | 0.505 |
| hypoxia_3wks | -0.901 | -2.117 |
| hypoxia_6wks | 0.409 | 0.848 |
| glycerol | -0.268 | 0.984 |
| cholesterol | 0.171 | 0.04 |
| AJ | 0.647 | 1.869 |
| Bibs02 | 0.111 | -0.338 |
| Bibs02c | -0.135 | -0.69 |
| BL6 | 0.28 | 1.43 |
| BL6a | 0.456 | 2.099 |
| BXD01 | 0.735 | 2.917 |
| BXD010 | 0.791 | 2.38 |
| BXD011 | 1.682 | 3.779 |
| BXD03 | 0.661 | 2.051 |
| BXD04 | -0.209 | 3.404 |
| BXD05 | 0.748 | 2.764 |
| BXD06 | 0.772 | 3.273 |
| BXD07 | 1.172 | 2.452 |
| BXD08 | 1.129 | 3.451 |
| BXD09 | 0.781 | 2.319 |
| CAST | 1.3 | 3.712 |
| CCcont | -0.785 | 0.288 |
| DS01 | 0.544 | -0.732 |
| DS02 | 0.487 | -1.182 |
| DS04 | -0.364 | 0.132 |
| DS0c | -0.195 | -0.757 |
| GP01 | 0.157 | -0.288 |
| GP02 | 0.619 | 0.034 |
| GP0c | 0.216 | 0.251 |
| NOD | 1.217 | 1.23 |
| NZO | 1.062 | 2.164 |
| PWK | 2.322 | 4.489 |
| H37Rv_KO_CtpC | 0.225 | 0.494 |
| H37Rv_KO_CtpD | -0.651 | 1.213 |
| H37Rv_KO_Rv1272 | 0.176 | 1.06 |
| H37Rv_KO_SugABC | -0.032 | 1.269 |
| H37Rv_KO_MbtN | 0.927 | 0.732 |
| Trans05 | 1.608 | 1.737 |
| macrophage_unactivated | -1.023 | -2.257 |
| IL1 | -0.486 | -1.0 |
| Rapamycin | -0.743 | -2.427 |
| Tcell | -0.362 | 0.596 |
| GMCSF | -0.349 | -0.694 |
| IFNab | -0.732 | -2.013 |
| IFNg | -0.184 | -1.505 |
| IFNg_GMCSF1 | -0.217 | -2.017 |
| Rv1432_day32 | -0.588 | 0.731 |
| Rv1565c_day32 | -0.607 | -1.311 |
| secA2_input | 1.241 | -0.377 |
| delta_Rv3594 | -0.24 | -0.234 |
| delta_Rv3717 | 0.247 | 0.766 |
| delta_Rv3811 | 0.138 | -1.084 |
| delta_Rv0954 | -0.548 | -0.596 |
| PonA1 | -0.615 | 0.792 |
| EccD1_KO | -0.987 | -0.72 |
| EspI_KO | 0.145 | -0.941 |
| PE35_KO | -0.648 | -0.998 |
| PPE68_KO | 0.32 | -0.893 |
| glycerol2 | -1.527 | -1.449 |
| lignocerate | -1.803 | -2.954 |
| oleate | -0.922 | -2.884 |
| phosphatidylcholine | -1.527 | -2.578 |
| acetate | -1.765 | -0.785 |
| glucAc | -1.717 | -1.674 |
| Rv0950ko | -0.178 | 1.447 |
| Rv1096ko | -0.404 | 0.072 |
| Rv3684ko | -0.193 | 1.601 |
| delta_otsA_trehalose | 1.027 | 0.147 |