Top 10 genes with highest correlation to Rv2647/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3697c/vapC48 | (cc=0.5784) | info on Rv3697c/vapC48 |
| Rv2808/- | (cc=0.5553) | info on Rv2808/- |
| Rv1160/mutT2 | (cc=0.5476) | info on Rv1160/mutT2 |
| Rv2669/- | (cc=0.5394) | info on Rv2669/- |
| Rv1763/- | (cc=0.5332) | info on Rv1763/- |
| Rv3749c/- | (cc=0.5289) | info on Rv3749c/- |
| Rv2841c/nusA | (cc=0.5225) | info on Rv2841c/nusA |
| Rv1646/PE17 | (cc=0.5101) | info on Rv1646/PE17 |
| Rv3366/spoU | (cc=0.5025) | info on Rv3366/spoU |
| Rv0984/moaB2 | (cc=0.5001) | info on Rv0984/moaB2 |
Correlation of Rv2647/- with Rv3366/spoU
Normalized LFCs for Rv2647/-:
(description and provenance of datasets)
| Rv2647/- | Rv3366/spoU | |
| Fe_supp_jason_reseq | -0.207 | -1.345 |
| low_pH_jason_reseq | 0.333 | -1.36 |
| NO_jason_reseq | 0.407 | 0.94 |
| B6_jason_reseq | -0.24 | 0.179 |
| MHCII_jason_reseq | 1.765 | 0.919 |
| Isoniazid02 | -0.519 | -0.556 |
| Rifampicin4 | 0.639 | 0.793 |
| Ethambutol3 | 0.0 | -0.154 |
| Meropenem3 | 0.264 | 0.381 |
| Vancomycin16 | 0.398 | -0.138 |
| Rv2680_day32 | -1.922 | -0.683 |
| H37Rv_KO_MarP | 1.187 | 1.012 |
| hypoxia_3wks | 0.431 | -0.463 |
| hypoxia_6wks | -1.324 | -0.662 |
| glycerol | -0.992 | 0.563 |
| cholesterol | -0.499 | -0.44 |
| AJ | 0.193 | -0.081 |
| Bibs02 | 0.242 | -0.162 |
| Bibs02c | 0.47 | -0.142 |
| BL6 | 0.574 | -0.081 |
| BL6a | 0.244 | -1.045 |
| BXD01 | 0.082 | -1.875 |
| BXD010 | -2.241 | -1.722 |
| BXD011 | -1.039 | -1.305 |
| BXD03 | -1.31 | -1.743 |
| BXD04 | -0.113 | -1.927 |
| BXD05 | -1.95 | -0.858 |
| BXD06 | -0.727 | -1.423 |
| BXD07 | -0.159 | -2.32 |
| BXD08 | 1.034 | -0.595 |
| BXD09 | -1.524 | -1.348 |
| CAST | 0.908 | 0.317 |
| CCcont | 0.016 | -1.909 |
| DS01 | 0.767 | -0.979 |
| DS02 | 0.581 | -0.922 |
| DS04 | -2.046 | -0.145 |
| DS0c | -0.652 | -0.94 |
| GP01 | -0.011 | 0.436 |
| GP02 | -1.364 | -1.308 |
| GP0c | -0.214 | -0.058 |
| NOD | 0.382 | -0.358 |
| NZO | -0.571 | 0.377 |
| PWK | 1.367 | 0.114 |
| H37Rv_KO_CtpC | 0.95 | -0.02 |
| H37Rv_KO_CtpD | -2.291 | -0.065 |
| H37Rv_KO_Rv1272 | -1.87 | -1.386 |
| H37Rv_KO_SugABC | -0.959 | 0.15 |
| H37Rv_KO_MbtN | -1.253 | -0.681 |
| Trans05 | -1.588 | -1.305 |
| macrophage_unactivated | -1.846 | -1.944 |
| IL1 | -3.028 | -2.115 |
| Rapamycin | -3.689 | -3.637 |
| Tcell | -2.333 | -1.522 |
| GMCSF | -3.303 | -1.426 |
| IFNab | -2.603 | -2.582 |
| IFNg | -2.616 | -2.138 |
| IFNg_GMCSF1 | -1.37 | -1.335 |
| Rv1432_day32 | -0.763 | -0.014 |
| Rv1565c_day32 | 0.58 | 0.916 |
| secA2_input | -0.576 | -0.833 |
| delta_Rv3594 | -0.642 | -2.145 |
| delta_Rv3717 | -0.505 | -0.545 |
| delta_Rv3811 | -1.222 | -0.568 |
| delta_Rv0954 | -0.444 | -1.344 |
| PonA1 | -0.726 | -0.68 |
| EccD1_KO | -1.092 | -0.355 |
| EspI_KO | -1.991 | 0.433 |
| PE35_KO | -0.362 | -1.811 |
| PPE68_KO | -0.128 | -2.358 |
| glycerol2 | 0.51 | 1.319 |
| lignocerate | 0.037 | 1.128 |
| oleate | 0.516 | -0.457 |
| phosphatidylcholine | 0.465 | 1.297 |
| acetate | -0.209 | 1.215 |
| glucAc | 0.158 | 1.557 |
| Rv0950ko | -0.488 | 1.963 |
| Rv1096ko | -0.133 | 1.215 |
| Rv3684ko | -0.95 | 2.227 |
| delta_otsA_trehalose | -2.038 | -1.723 |