Top 10 genes with highest correlation to Rv2647/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3697c/vapC48 | (cc=0.5784) | info on Rv3697c/vapC48 |
| Rv2808/- | (cc=0.5553) | info on Rv2808/- |
| Rv1160/mutT2 | (cc=0.5476) | info on Rv1160/mutT2 |
| Rv2669/- | (cc=0.5394) | info on Rv2669/- |
| Rv1763/- | (cc=0.5332) | info on Rv1763/- |
| Rv3749c/- | (cc=0.5289) | info on Rv3749c/- |
| Rv2841c/nusA | (cc=0.5225) | info on Rv2841c/nusA |
| Rv1646/PE17 | (cc=0.5101) | info on Rv1646/PE17 |
| Rv3366/spoU | (cc=0.5025) | info on Rv3366/spoU |
| Rv0984/moaB2 | (cc=0.5001) | info on Rv0984/moaB2 |
Correlation of Rv2647/- with Rv3697c/vapC48
Normalized LFCs for Rv2647/-:
(description and provenance of datasets)
| Rv2647/- | Rv3697c/vapC48 | |
| Fe_supp_jason_reseq | -0.207 | 1.004 |
| low_pH_jason_reseq | 0.333 | 0.248 |
| NO_jason_reseq | 0.407 | 0.257 |
| B6_jason_reseq | -0.24 | 0.432 |
| MHCII_jason_reseq | 1.765 | 0.625 |
| Isoniazid02 | -0.519 | 0.127 |
| Rifampicin4 | 0.639 | 0.986 |
| Ethambutol3 | 0.0 | 0.259 |
| Meropenem3 | 0.264 | 0.623 |
| Vancomycin16 | 0.398 | 0.849 |
| Rv2680_day32 | -1.922 | -0.608 |
| H37Rv_KO_MarP | 1.187 | 0.141 |
| hypoxia_3wks | 0.431 | -0.187 |
| hypoxia_6wks | -1.324 | 0.599 |
| glycerol | -0.992 | -1.059 |
| cholesterol | -0.499 | -0.18 |
| AJ | 0.193 | 1.141 |
| Bibs02 | 0.242 | 0.148 |
| Bibs02c | 0.47 | 1.023 |
| BL6 | 0.574 | 0.43 |
| BL6a | 0.244 | 0.946 |
| BXD01 | 0.082 | 1.006 |
| BXD010 | -2.241 | 0.63 |
| BXD011 | -1.039 | 0.497 |
| BXD03 | -1.31 | 0.265 |
| BXD04 | -0.113 | 0.173 |
| BXD05 | -1.95 | 0.037 |
| BXD06 | -0.727 | 0.352 |
| BXD07 | -0.159 | 0.319 |
| BXD08 | 1.034 | 0.723 |
| BXD09 | -1.524 | 0.615 |
| CAST | 0.908 | 0.929 |
| CCcont | 0.016 | 0.578 |
| DS01 | 0.767 | 0.7 |
| DS02 | 0.581 | 1.311 |
| DS04 | -2.046 | 0.926 |
| DS0c | -0.652 | 1.073 |
| GP01 | -0.011 | 0.32 |
| GP02 | -1.364 | 1.123 |
| GP0c | -0.214 | 0.655 |
| NOD | 0.382 | 1.15 |
| NZO | -0.571 | 0.351 |
| PWK | 1.367 | 1.223 |
| H37Rv_KO_CtpC | 0.95 | 1.453 |
| H37Rv_KO_CtpD | -2.291 | 0.915 |
| H37Rv_KO_Rv1272 | -1.87 | -0.06 |
| H37Rv_KO_SugABC | -0.959 | 1.48 |
| H37Rv_KO_MbtN | -1.253 | 0.337 |
| Trans05 | -1.588 | 1.053 |
| macrophage_unactivated | -1.846 | -0.675 |
| IL1 | -3.028 | -1.053 |
| Rapamycin | -3.689 | -1.789 |
| Tcell | -2.333 | -0.534 |
| GMCSF | -3.303 | -1.595 |
| IFNab | -2.603 | -0.98 |
| IFNg | -2.616 | -0.676 |
| IFNg_GMCSF1 | -1.37 | -1.254 |
| Rv1432_day32 | -0.763 | -1.395 |
| Rv1565c_day32 | 0.58 | 0.684 |
| secA2_input | -0.576 | -0.368 |
| delta_Rv3594 | -0.642 | 0.021 |
| delta_Rv3717 | -0.505 | -0.279 |
| delta_Rv3811 | -1.222 | -0.042 |
| delta_Rv0954 | -0.444 | -0.239 |
| PonA1 | -0.726 | -0.059 |
| EccD1_KO | -1.092 | -0.576 |
| EspI_KO | -1.991 | 0.02 |
| PE35_KO | -0.362 | -0.257 |
| PPE68_KO | -0.128 | -0.307 |
| glycerol2 | 0.51 | 0.743 |
| lignocerate | 0.037 | 1.221 |
| oleate | 0.516 | 0.95 |
| phosphatidylcholine | 0.465 | 1.308 |
| acetate | -0.209 | 0.329 |
| glucAc | 0.158 | 0.432 |
| Rv0950ko | -0.488 | 1.077 |
| Rv1096ko | -0.133 | 0.033 |
| Rv3684ko | -0.95 | 0.701 |
| delta_otsA_trehalose | -2.038 | -0.143 |