Top 10 genes with highest correlation to Rv2643/arsC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0333/- | (cc=0.549) | info on Rv0333/- |
| Rv3395A/- | (cc=0.4905) | info on Rv3395A/- |
| Rv0418/lpqL | (cc=0.4466) | info on Rv0418/lpqL |
| Rv1164/narI | (cc=0.4447) | info on Rv1164/narI |
| Rv0435c/- | (cc=0.4424) | info on Rv0435c/- |
| Rv2670c/- | (cc=0.4376) | info on Rv2670c/- |
| Rv0273c/- | (cc=0.437) | info on Rv0273c/- |
| Rv1935c/echA13 | (cc=0.4269) | info on Rv1935c/echA13 |
| Rv3175/- | (cc=0.4258) | info on Rv3175/- |
| Rv0869c/moaA2 | (cc=0.4164) | info on Rv0869c/moaA2 |
Correlation of Rv2643/arsC with Rv0273c/-
Normalized LFCs for Rv2643/arsC:
(description and provenance of datasets)
| Rv2643/arsC | Rv0273c/- | |
| Fe_supp_jason_reseq | -0.459 | -0.497 |
| low_pH_jason_reseq | -0.025 | -0.465 |
| NO_jason_reseq | 0.278 | -0.16 |
| B6_jason_reseq | 0.176 | -0.25 |
| MHCII_jason_reseq | 0.255 | 0.358 |
| Isoniazid02 | 0.371 | 0.24 |
| Rifampicin4 | 0.106 | 0.0 |
| Ethambutol3 | 0.173 | 0.338 |
| Meropenem3 | 2.282 | 3.393 |
| Vancomycin16 | 0.305 | 0.738 |
| Rv2680_day32 | 0.105 | -0.305 |
| H37Rv_KO_MarP | 0.219 | 0.941 |
| hypoxia_3wks | -0.171 | 0.203 |
| hypoxia_6wks | -0.313 | 0.0 |
| glycerol | -0.591 | 0.0 |
| cholesterol | -0.029 | -0.396 |
| AJ | 0.103 | -0.17 |
| Bibs02 | -0.162 | -0.827 |
| Bibs02c | -0.327 | -0.459 |
| BL6 | 0.192 | 0.42 |
| BL6a | -0.165 | -0.237 |
| BXD01 | 0.0 | 0.896 |
| BXD010 | 0.439 | -1.253 |
| BXD011 | -0.045 | 0.427 |
| BXD03 | -0.377 | -0.099 |
| BXD04 | 0.432 | 0.427 |
| BXD05 | 0.642 | 0.195 |
| BXD06 | 0.078 | 0.786 |
| BXD07 | 0.021 | 0.361 |
| BXD08 | 0.0 | -0.039 |
| BXD09 | 0.19 | 0.204 |
| CAST | -0.255 | 0.063 |
| CCcont | -0.314 | 0.102 |
| DS01 | -0.084 | -0.32 |
| DS02 | 0.096 | -0.983 |
| DS04 | 0.412 | 0.305 |
| DS0c | 0.137 | -0.328 |
| GP01 | 0.324 | 0.858 |
| GP02 | -0.184 | -0.452 |
| GP0c | -0.645 | 0.311 |
| NOD | 0.467 | -0.13 |
| NZO | 0.126 | 0.669 |
| PWK | -0.02 | -0.028 |
| H37Rv_KO_CtpC | -0.18 | 0.545 |
| H37Rv_KO_CtpD | -0.228 | -0.112 |
| H37Rv_KO_Rv1272 | -0.133 | 0.796 |
| H37Rv_KO_SugABC | 0.388 | 0.447 |
| H37Rv_KO_MbtN | -1.178 | -0.636 |
| Trans05 | -0.145 | 0.648 |
| macrophage_unactivated | 0.401 | 0.0 |
| IL1 | 0.11 | -0.581 |
| Rapamycin | 0.178 | 0.236 |
| Tcell | -0.222 | 0.411 |
| GMCSF | -0.327 | -1.31 |
| IFNab | 0.0 | -0.877 |
| IFNg | 0.818 | -0.446 |
| IFNg_GMCSF1 | 0.506 | 0.082 |
| Rv1432_day32 | 0.357 | 0.155 |
| Rv1565c_day32 | -0.851 | 0.306 |
| secA2_input | 0.18 | 1.335 |
| delta_Rv3594 | -0.592 | 0.067 |
| delta_Rv3717 | -0.741 | 0.307 |
| delta_Rv3811 | -0.915 | 0.745 |
| delta_Rv0954 | -0.258 | -0.028 |
| PonA1 | 1.005 | 0.366 |
| EccD1_KO | 0.0 | -0.977 |
| EspI_KO | 0.194 | -0.228 |
| PE35_KO | -0.088 | -0.201 |
| PPE68_KO | -0.262 | -0.413 |
| glycerol2 | -0.062 | 0.752 |
| lignocerate | 0.132 | 0.444 |
| oleate | 0.254 | 0.669 |
| phosphatidylcholine | 0.207 | 0.776 |
| acetate | -0.073 | 0.106 |
| glucAc | -0.027 | -0.363 |
| Rv0950ko | 0.612 | 0.443 |
| Rv1096ko | 1.149 | 0.115 |
| Rv3684ko | 0.344 | -0.085 |
| delta_otsA_trehalose | -0.771 | -2.517 |