Top 10 genes with highest correlation to Rv2643/arsC:
update plot | correlation | link to info on gene |
---|---|---|
Rv0333/- | (cc=0.549) | info on Rv0333/- |
Rv3395A/- | (cc=0.4905) | info on Rv3395A/- |
Rv0418/lpqL | (cc=0.4466) | info on Rv0418/lpqL |
Rv1164/narI | (cc=0.4447) | info on Rv1164/narI |
Rv0435c/- | (cc=0.4424) | info on Rv0435c/- |
Rv2670c/- | (cc=0.4376) | info on Rv2670c/- |
Rv0273c/- | (cc=0.437) | info on Rv0273c/- |
Rv1935c/echA13 | (cc=0.4269) | info on Rv1935c/echA13 |
Rv3175/- | (cc=0.4258) | info on Rv3175/- |
Rv0869c/moaA2 | (cc=0.4164) | info on Rv0869c/moaA2 |
Correlation of Rv2643/arsC with Rv0418/lpqL
Normalized LFCs for Rv2643/arsC:
(description and provenance of datasets)
Rv2643/arsC | Rv0418/lpqL | |
Fe_supp_jason_reseq | -0.459 | -0.721 |
low_pH_jason_reseq | -0.025 | -0.105 |
NO_jason_reseq | 0.278 | -0.459 |
B6_jason_reseq | 0.176 | -0.445 |
MHCII_jason_reseq | 0.255 | 0.712 |
Isoniazid02 | 0.371 | 0.981 |
Rifampicin4 | 0.106 | 0.319 |
Ethambutol3 | 0.173 | 0.866 |
Meropenem3 | 2.282 | 3.701 |
Vancomycin16 | 0.305 | 0.459 |
Rv2680_day32 | 0.105 | -1.64 |
H37Rv_KO_MarP | 0.219 | 1.348 |
hypoxia_3wks | -0.171 | -0.183 |
hypoxia_6wks | -0.313 | -0.685 |
glycerol | -0.591 | 0.543 |
cholesterol | -0.029 | 0.284 |
AJ | 0.103 | -0.192 |
Bibs02 | -0.162 | 1.069 |
Bibs02c | -0.327 | -0.073 |
BL6 | 0.192 | -0.216 |
BL6a | -0.165 | -1.065 |
BXD01 | 0.0 | -1.278 |
BXD010 | 0.439 | -1.018 |
BXD011 | -0.045 | -0.71 |
BXD03 | -0.377 | -0.862 |
BXD04 | 0.432 | -1.143 |
BXD05 | 0.642 | -0.674 |
BXD06 | 0.078 | -1.197 |
BXD07 | 0.021 | -0.668 |
BXD08 | 0.0 | -1.09 |
BXD09 | 0.19 | -0.783 |
CAST | -0.255 | -0.429 |
CCcont | -0.314 | -0.361 |
DS01 | -0.084 | 0.717 |
DS02 | 0.096 | 0.97 |
DS04 | 0.412 | -0.136 |
DS0c | 0.137 | -0.493 |
GP01 | 0.324 | -0.034 |
GP02 | -0.184 | -1.034 |
GP0c | -0.645 | -0.604 |
NOD | 0.467 | 0.026 |
NZO | 0.126 | -0.318 |
PWK | -0.02 | -0.649 |
H37Rv_KO_CtpC | -0.18 | -0.937 |
H37Rv_KO_CtpD | -0.228 | 1.28 |
H37Rv_KO_Rv1272 | -0.133 | 0.25 |
H37Rv_KO_SugABC | 0.388 | 0.258 |
H37Rv_KO_MbtN | -1.178 | -1.244 |
Trans05 | -0.145 | -0.433 |
macrophage_unactivated | 0.401 | 0.079 |
IL1 | 0.11 | 0.148 |
Rapamycin | 0.178 | 0.847 |
Tcell | -0.222 | -0.342 |
GMCSF | -0.327 | -0.576 |
IFNab | 0.0 | 0.296 |
IFNg | 0.818 | -0.139 |
IFNg_GMCSF1 | 0.506 | 0.157 |
Rv1432_day32 | 0.357 | -0.645 |
Rv1565c_day32 | -0.851 | 0.567 |
secA2_input | 0.18 | 0.16 |
delta_Rv3594 | -0.592 | -1.94 |
delta_Rv3717 | -0.741 | -1.487 |
delta_Rv3811 | -0.915 | -1.975 |
delta_Rv0954 | -0.258 | -0.505 |
PonA1 | 1.005 | -0.993 |
EccD1_KO | 0.0 | 0.25 |
EspI_KO | 0.194 | 0.054 |
PE35_KO | -0.088 | 0.222 |
PPE68_KO | -0.262 | -0.458 |
glycerol2 | -0.062 | 0.15 |
lignocerate | 0.132 | -0.069 |
oleate | 0.254 | -1.581 |
phosphatidylcholine | 0.207 | -0.531 |
acetate | -0.073 | 0.941 |
glucAc | -0.027 | 0.378 |
Rv0950ko | 0.612 | 0.238 |
Rv1096ko | 1.149 | 0.573 |
Rv3684ko | 0.344 | 0.383 |
delta_otsA_trehalose | -0.771 | -0.081 |