Top 10 genes with highest correlation to Rv2613c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3208A/TB9.4 | (cc=0.6686) | info on Rv3208A/TB9.4 |
| Rv2240c/- | (cc=0.6501) | info on Rv2240c/- |
| Rv1852/ureG | (cc=0.65) | info on Rv1852/ureG |
| Rv1038c/esxJ | (cc=0.6341) | info on Rv1038c/esxJ |
| Rv2140c/TB18.6 | (cc=0.628) | info on Rv2140c/TB18.6 |
| Rv2237A/- | (cc=0.6221) | info on Rv2237A/- |
| Rv3536c/hsaE | (cc=0.6103) | info on Rv3536c/hsaE |
| Rv1323/fadA4 | (cc=0.6071) | info on Rv1323/fadA4 |
| Rv1725c/- | (cc=0.6015) | info on Rv1725c/- |
| Rv0757/phoP | (cc=0.5985) | info on Rv0757/phoP |
Correlation of Rv2613c/- with Rv1852/ureG
Normalized LFCs for Rv2613c/-:
(description and provenance of datasets)
| Rv2613c/- | Rv1852/ureG | |
| Fe_supp_jason_reseq | 0.268 | -0.595 |
| low_pH_jason_reseq | -1.884 | -1.722 |
| NO_jason_reseq | -2.956 | -0.507 |
| B6_jason_reseq | -1.402 | -2.156 |
| MHCII_jason_reseq | -1.234 | -2.675 |
| Isoniazid02 | -2.196 | 0.416 |
| Rifampicin4 | 0.401 | -0.349 |
| Ethambutol3 | 1.093 | 0.084 |
| Meropenem3 | -0.61 | 0.672 |
| Vancomycin16 | 0.0 | 0.0 |
| Rv2680_day32 | -2.64 | -2.715 |
| H37Rv_KO_MarP | 2.047 | 0.837 |
| hypoxia_3wks | -3.102 | -1.95 |
| hypoxia_6wks | -2.637 | -1.169 |
| glycerol | -0.136 | -0.844 |
| cholesterol | -1.687 | 0.341 |
| AJ | -2.005 | 0.449 |
| Bibs02 | -2.905 | -0.053 |
| Bibs02c | -0.455 | -0.497 |
| BL6 | -2.084 | 0.103 |
| BL6a | -0.729 | -1.808 |
| BXD01 | -2.527 | -1.786 |
| BXD010 | -2.485 | -2.505 |
| BXD011 | -1.765 | -0.67 |
| BXD03 | -2.623 | -0.738 |
| BXD04 | -2.399 | -1.434 |
| BXD05 | -2.477 | -0.359 |
| BXD06 | -2.457 | -1.859 |
| BXD07 | -2.686 | -1.841 |
| BXD08 | -2.58 | -0.832 |
| BXD09 | -2.726 | -1.404 |
| CAST | -3.337 | -0.108 |
| CCcont | -0.355 | -0.829 |
| DS01 | -3.273 | -1.711 |
| DS02 | -3.297 | -0.696 |
| DS04 | -2.572 | -0.637 |
| DS0c | 0.919 | 0.281 |
| GP01 | -1.915 | -1.354 |
| GP02 | -1.614 | -1.057 |
| GP0c | -2.522 | -1.728 |
| NOD | -1.627 | -1.679 |
| NZO | -3.024 | 0.451 |
| PWK | -2.718 | -0.176 |
| H37Rv_KO_CtpC | -1.813 | -1.598 |
| H37Rv_KO_CtpD | -2.457 | 0.105 |
| H37Rv_KO_Rv1272 | -2.736 | 0.293 |
| H37Rv_KO_SugABC | -1.015 | -0.825 |
| H37Rv_KO_MbtN | -1.803 | 0.029 |
| Trans05 | -1.397 | 0.727 |
| macrophage_unactivated | 0.537 | 0.581 |
| IL1 | -2.011 | -0.303 |
| Rapamycin | -0.592 | -0.313 |
| Tcell | -0.629 | -0.583 |
| GMCSF | -0.792 | -0.515 |
| IFNab | -1.636 | 1.016 |
| IFNg | -1.812 | -0.152 |
| IFNg_GMCSF1 | -0.943 | 0.842 |
| Rv1432_day32 | 0.0 | -0.18 |
| Rv1565c_day32 | 2.003 | 0.058 |
| secA2_input | -0.751 | 1.268 |
| delta_Rv3594 | 1.059 | 1.199 |
| delta_Rv3717 | -0.668 | 0.559 |
| delta_Rv3811 | 0.0 | 0.0 |
| delta_Rv0954 | -0.398 | 2.305 |
| PonA1 | -1.592 | -2.069 |
| EccD1_KO | 1.924 | -0.635 |
| EspI_KO | 0.419 | -0.319 |
| PE35_KO | 0.939 | 1.076 |
| PPE68_KO | 1.286 | -0.038 |
| glycerol2 | 1.684 | 3.213 |
| lignocerate | 3.801 | 3.973 |
| oleate | 0.0 | 0.196 |
| phosphatidylcholine | 2.899 | 3.169 |
| acetate | 4.337 | 3.498 |
| glucAc | 3.342 | 3.418 |
| Rv0950ko | -1.013 | -0.151 |
| Rv1096ko | 0.16 | 0.0 |
| Rv3684ko | 0.891 | 0.789 |
| delta_otsA_trehalose | -1.204 | 2.628 |