Top 10 genes with highest correlation to Rv2613c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3208A/TB9.4 | (cc=0.6686) | info on Rv3208A/TB9.4 |
| Rv2240c/- | (cc=0.6501) | info on Rv2240c/- |
| Rv1852/ureG | (cc=0.65) | info on Rv1852/ureG |
| Rv1038c/esxJ | (cc=0.6341) | info on Rv1038c/esxJ |
| Rv2140c/TB18.6 | (cc=0.628) | info on Rv2140c/TB18.6 |
| Rv2237A/- | (cc=0.6221) | info on Rv2237A/- |
| Rv3536c/hsaE | (cc=0.6103) | info on Rv3536c/hsaE |
| Rv1323/fadA4 | (cc=0.6071) | info on Rv1323/fadA4 |
| Rv1725c/- | (cc=0.6015) | info on Rv1725c/- |
| Rv0757/phoP | (cc=0.5985) | info on Rv0757/phoP |
Correlation of Rv2613c/- with Rv0757/phoP
Normalized LFCs for Rv2613c/-:
(description and provenance of datasets)
| Rv2613c/- | Rv0757/phoP | |
| Fe_supp_jason_reseq | 0.268 | 3.743 |
| low_pH_jason_reseq | -1.884 | 2.056 |
| NO_jason_reseq | -2.956 | -3.04 |
| B6_jason_reseq | -1.402 | -0.237 |
| MHCII_jason_reseq | -1.234 | -0.839 |
| Isoniazid02 | -2.196 | -2.642 |
| Rifampicin4 | 0.401 | -2.957 |
| Ethambutol3 | 1.093 | 0.242 |
| Meropenem3 | -0.61 | 0.513 |
| Vancomycin16 | 0.0 | -1.345 |
| Rv2680_day32 | -2.64 | 2.066 |
| H37Rv_KO_MarP | 2.047 | 3.807 |
| hypoxia_3wks | -3.102 | -2.628 |
| hypoxia_6wks | -2.637 | -2.76 |
| glycerol | -0.136 | -6.0 |
| cholesterol | -1.687 | -4.916 |
| AJ | -2.005 | -6.0 |
| Bibs02 | -2.905 | -4.225 |
| Bibs02c | -0.455 | -5.058 |
| BL6 | -2.084 | -4.37 |
| BL6a | -0.729 | -5.384 |
| BXD01 | -2.527 | -4.551 |
| BXD010 | -2.485 | -4.347 |
| BXD011 | -1.765 | -3.528 |
| BXD03 | -2.623 | -4.724 |
| BXD04 | -2.399 | -4.321 |
| BXD05 | -2.477 | -4.702 |
| BXD06 | -2.457 | -4.664 |
| BXD07 | -2.686 | -4.838 |
| BXD08 | -2.58 | -4.647 |
| BXD09 | -2.726 | -4.91 |
| CAST | -3.337 | -6.0 |
| CCcont | -0.355 | -0.89 |
| DS01 | -3.273 | -6.0 |
| DS02 | -3.297 | -5.026 |
| DS04 | -2.572 | -5.373 |
| DS0c | 0.919 | -4.737 |
| GP01 | -1.915 | -3.45 |
| GP02 | -1.614 | -2.907 |
| GP0c | -2.522 | -3.904 |
| NOD | -1.627 | -4.535 |
| NZO | -3.024 | -6.0 |
| PWK | -2.718 | -5.89 |
| H37Rv_KO_CtpC | -1.813 | -4.499 |
| H37Rv_KO_CtpD | -2.457 | -3.111 |
| H37Rv_KO_Rv1272 | -2.736 | -4.54 |
| H37Rv_KO_SugABC | -1.015 | -3.362 |
| H37Rv_KO_MbtN | -1.803 | -2.454 |
| Trans05 | -1.397 | -4.206 |
| macrophage_unactivated | 0.537 | -1.96 |
| IL1 | -2.011 | -1.842 |
| Rapamycin | -0.592 | -1.274 |
| Tcell | -0.629 | -1.678 |
| GMCSF | -0.792 | -2.64 |
| IFNab | -1.636 | -3.023 |
| IFNg | -1.812 | -2.673 |
| IFNg_GMCSF1 | -0.943 | -3.142 |
| Rv1432_day32 | 0.0 | 0.458 |
| Rv1565c_day32 | 2.003 | 1.579 |
| secA2_input | -0.751 | -0.238 |
| delta_Rv3594 | 1.059 | -6.0 |
| delta_Rv3717 | -0.668 | -5.163 |
| delta_Rv3811 | 0.0 | -6.0 |
| delta_Rv0954 | -0.398 | -1.579 |
| PonA1 | -1.592 | -0.548 |
| EccD1_KO | 1.924 | -1.174 |
| EspI_KO | 0.419 | -0.416 |
| PE35_KO | 0.939 | 2.173 |
| PPE68_KO | 1.286 | 1.507 |
| glycerol2 | 1.684 | 0.193 |
| lignocerate | 3.801 | 0.0 |
| oleate | 0.0 | 2.935 |
| phosphatidylcholine | 2.899 | 6.0 |
| acetate | 4.337 | 0.0 |
| glucAc | 3.342 | 0.272 |
| Rv0950ko | -1.013 | 0.299 |
| Rv1096ko | 0.16 | 0.0 |
| Rv3684ko | 0.891 | 0.164 |
| delta_otsA_trehalose | -1.204 | -2.245 |