TnSeqCorr

Top 10 genes with highest correlation to Rv2605c/tesB2:

update plotcorrelationlink to info on gene
Rv1589/bioB (cc=0.7677) info on Rv1589/bioB
Rv1590/- (cc=0.7545) info on Rv1590/-
Rv1569/bioF1 (cc=0.7453) info on Rv1569/bioF1
Rv1568/bioA (cc=0.7421) info on Rv1568/bioA
Rv2606c/snzP (cc=0.7242) info on Rv2606c/snzP
Rv3197/- (cc=0.7159) info on Rv3197/-
Rv1273c/- (cc=0.7111) info on Rv1273c/-
Rv2604c/snoP (cc=0.7088) info on Rv2604c/snoP
Rv3616c/espA (cc=0.7036) info on Rv3616c/espA
Rv0485/- (cc=0.6805) info on Rv0485/-

Correlation of Rv2605c/tesB2 with Rv3616c/espA

Normalized LFCs for Rv2605c/tesB2:
(description and provenance of datasets)
Rv2605c/tesB2Rv3616c/espA
Fe_supp_jason_reseq

0.65

0.087

low_pH_jason_reseq

-0.233

-0.775

NO_jason_reseq

-0.853

-1.278

B6_jason_reseq

-1.819

-3.09

MHCII_jason_reseq

-2.894

-2.722

Isoniazid02

-0.016

0.476

Rifampicin4

-0.582

0.241

Ethambutol3

0.758

-0.018

Meropenem3

2.302

0.789

Vancomycin16

-0.605

-0.18

Rv2680_day32

-3.395

-1.717

H37Rv_KO_MarP

-0.871

0.381

hypoxia_3wks

0.59

0.024

hypoxia_6wks

-0.094

-0.098

glycerol

-2.602

-1.435

cholesterol

-2.958

-1.373

AJ

-3.343

-4.551

Bibs02

-0.884

-4.346

Bibs02c

-2.173

-4.142

BL6

-1.356

-3.453

BL6a

-2.29

-4.605

BXD01

-1.539

-3.648

BXD010

-0.192

-2.883

BXD011

-0.933

-2.961

BXD03

-0.503

-3.143

BXD04

-1.43

-3.155

BXD05

-0.798

-2.17

BXD06

-1.069

-3.908

BXD07

-0.705

-3.771

BXD08

-1.138

-3.672

BXD09

-0.917

-4.181

CAST

-2.663

-5.474

CCcont

0.012

-1.136

DS01

-3.646

-6.0

DS02

-1.987

-5.764

DS04

-1.266

-3.671

DS0c

-2.206

-5.466

GP01

-0.921

-3.404

GP02

-1.449

-2.752

GP0c

-1.713

-1.597

NOD

-2.833

-1.995

NZO

-4.319

-5.358

PWK

-2.762

-5.836

H37Rv_KO_CtpC

-0.355

-2.684

H37Rv_KO_CtpD

-0.131

-2.791

H37Rv_KO_Rv1272

-1.344

-1.864

H37Rv_KO_SugABC

0.206

-1.092

H37Rv_KO_MbtN

-1.026

0.118

Trans05

-0.957

-1.933

macrophage_unactivated

0.309

-0.079

IL1

0.208

1.35

Rapamycin

0.463

-0.037

Tcell

0.658

-0.841

GMCSF

1.415

2.094

IFNab

-0.178

1.321

IFNg

0.187

-1.109

IFNg_GMCSF1

-0.955

-0.628

Rv1432_day32

-1.25

-2.926

Rv1565c_day32

-0.232

-3.852

secA2_input

-0.199

-0.211

delta_Rv3594

-0.158

0.101

delta_Rv3717

-1.155

-0.448

delta_Rv3811

-0.341

-0.094

delta_Rv0954

0.919

-1.009

PonA1

0.298

-1.103

EccD1_KO

0.71

0.135

EspI_KO

0.687

0.342

PE35_KO

0.166

-0.502

PPE68_KO

1.001

-0.618

glycerol2

0.226

2.046

lignocerate

0.011

0.645

oleate

-0.054

0.305

phosphatidylcholine

0.472

1.689

acetate

-0.489

-0.362

glucAc

0.269

-0.715

Rv0950ko

0.241

0.326

Rv1096ko

0.781

-0.199

Rv3684ko

-0.079

0.174

delta_otsA_trehalose

1.518

-0.88