TnSeqCorr

Top 10 genes with highest correlation to Rv2605c/tesB2:

update plotcorrelationlink to info on gene
Rv1589/bioB (cc=0.7677) info on Rv1589/bioB
Rv1590/- (cc=0.7545) info on Rv1590/-
Rv1569/bioF1 (cc=0.7453) info on Rv1569/bioF1
Rv1568/bioA (cc=0.7421) info on Rv1568/bioA
Rv2606c/snzP (cc=0.7242) info on Rv2606c/snzP
Rv3197/- (cc=0.7159) info on Rv3197/-
Rv1273c/- (cc=0.7111) info on Rv1273c/-
Rv2604c/snoP (cc=0.7088) info on Rv2604c/snoP
Rv3616c/espA (cc=0.7036) info on Rv3616c/espA
Rv0485/- (cc=0.6805) info on Rv0485/-

Correlation of Rv2605c/tesB2 with Rv2606c/snzP

Normalized LFCs for Rv2605c/tesB2:
(description and provenance of datasets)
Rv2605c/tesB2Rv2606c/snzP
Fe_supp_jason_reseq

0.65

-0.532

low_pH_jason_reseq

-0.233

1.435

NO_jason_reseq

-0.853

-1.089

B6_jason_reseq

-1.819

-2.511

MHCII_jason_reseq

-2.894

-1.955

Isoniazid02

-0.016

1.526

Rifampicin4

-0.582

0.322

Ethambutol3

0.758

0.0

Meropenem3

2.302

2.004

Vancomycin16

-0.605

0.066

Rv2680_day32

-3.395

-2.619

H37Rv_KO_MarP

-0.871

0.454

hypoxia_3wks

0.59

-1.033

hypoxia_6wks

-0.094

-0.649

glycerol

-2.602

-4.166

cholesterol

-2.958

-2.988

AJ

-3.343

-4.787

Bibs02

-0.884

-3.772

Bibs02c

-2.173

-4.317

BL6

-1.356

-2.581

BL6a

-2.29

-4.087

BXD01

-1.539

-2.687

BXD010

-0.192

-2.642

BXD011

-0.933

-2.628

BXD03

-0.503

-2.79

BXD04

-1.43

-2.551

BXD05

-0.798

-2.52

BXD06

-1.069

-2.754

BXD07

-0.705

-2.857

BXD08

-1.138

-2.744

BXD09

-0.917

-2.899

CAST

-2.663

-3.62

CCcont

0.012

0.366

DS01

-3.646

-4.637

DS02

-1.987

-4.487

DS04

-1.266

-3.809

DS0c

-2.206

-4.475

GP01

-0.921

-2.037

GP02

-1.449

-1.717

GP0c

-1.713

-1.102

NOD

-2.833

-3.254

NZO

-4.319

-4.115

PWK

-2.762

-3.851

H37Rv_KO_CtpC

-0.355

-3.042

H37Rv_KO_CtpD

-0.131

-2.076

H37Rv_KO_Rv1272

-1.344

-2.91

H37Rv_KO_SugABC

0.206

-1.855

H37Rv_KO_MbtN

-1.026

0.204

Trans05

-0.957

-2.696

macrophage_unactivated

0.309

1.405

IL1

0.208

0.433

Rapamycin

0.463

0.273

Tcell

0.658

0.74

GMCSF

1.415

1.624

IFNab

-0.178

1.137

IFNg

0.187

1.005

IFNg_GMCSF1

-0.955

0.459

Rv1432_day32

-1.25

-0.632

Rv1565c_day32

-0.232

-0.415

secA2_input

-0.199

-1.183

delta_Rv3594

-0.158

0.878

delta_Rv3717

-1.155

0.0

delta_Rv3811

-0.341

0.642

delta_Rv0954

0.919

1.11

PonA1

0.298

1.579

EccD1_KO

0.71

-2.082

EspI_KO

0.687

-0.108

PE35_KO

0.166

-2.112

PPE68_KO

1.001

-1.328

glycerol2

0.226

0.0

lignocerate

0.011

0.168

oleate

-0.054

0.0

phosphatidylcholine

0.472

0.193

acetate

-0.489

0.0

glucAc

0.269

0.272

Rv0950ko

0.241

0.389

Rv1096ko

0.781

-0.971

Rv3684ko

-0.079

-1.641

delta_otsA_trehalose

1.518

-1.003