Top 10 genes with highest correlation to Rv2602/vapC41:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3323c/moaX | (cc=0.5054) | info on Rv3323c/moaX |
| Rv1489A/- | (cc=0.4764) | info on Rv1489A/- |
| Rv2077c/- | (cc=0.4682) | info on Rv2077c/- |
| Rv0342/iniA | (cc=0.4672) | info on Rv0342/iniA |
| Rv2208/cobS | (cc=0.4656) | info on Rv2208/cobS |
| Rv0843/- | (cc=0.4639) | info on Rv0843/- |
| Rv2954c/- | (cc=0.4588) | info on Rv2954c/- |
| Rv3435c/- | (cc=0.4436) | info on Rv3435c/- |
| Rv0160c/PE4 | (cc=0.4397) | info on Rv0160c/PE4 |
| Rv0872c/PE_PGRS15 | (cc=0.438) | info on Rv0872c/PE_PGRS15 |
Correlation of Rv2602/vapC41 with Rv2954c/-
Normalized LFCs for Rv2602/vapC41:
(description and provenance of datasets)
| Rv2602/vapC41 | Rv2954c/- | |
| Fe_supp_jason_reseq | 0.177 | 0.18 |
| low_pH_jason_reseq | -1.456 | -1.161 |
| NO_jason_reseq | -0.507 | -0.412 |
| B6_jason_reseq | -0.245 | -0.145 |
| MHCII_jason_reseq | 0.183 | -0.033 |
| Isoniazid02 | -1.794 | -0.723 |
| Rifampicin4 | 0.403 | 0.241 |
| Ethambutol3 | -1.769 | -0.405 |
| Meropenem3 | -1.022 | -0.68 |
| Vancomycin16 | -0.836 | -0.17 |
| Rv2680_day32 | 0.05 | 0.205 |
| H37Rv_KO_MarP | 0.052 | -0.069 |
| hypoxia_3wks | -0.227 | -0.104 |
| hypoxia_6wks | -0.299 | 0.052 |
| glycerol | -1.008 | 0.439 |
| cholesterol | 0.234 | -0.029 |
| AJ | 0.837 | -0.123 |
| Bibs02 | -0.543 | -0.449 |
| Bibs02c | 0.191 | -0.631 |
| BL6 | 0.597 | 0.216 |
| BL6a | -0.096 | 0.263 |
| BXD01 | 0.043 | 0.268 |
| BXD010 | -0.593 | 0.447 |
| BXD011 | 0.0 | 0.468 |
| BXD03 | -0.346 | 0.66 |
| BXD04 | 0.19 | 0.546 |
| BXD05 | -0.379 | 0.644 |
| BXD06 | 0.042 | 0.056 |
| BXD07 | -0.134 | 0.194 |
| BXD08 | 0.194 | -0.063 |
| BXD09 | -0.072 | 0.494 |
| CAST | -0.656 | -0.053 |
| CCcont | -0.048 | 0.171 |
| DS01 | -0.452 | -0.062 |
| DS02 | -0.44 | -0.169 |
| DS04 | 0.649 | 0.222 |
| DS0c | -0.195 | 0.368 |
| GP01 | -0.556 | 1.056 |
| GP02 | -0.242 | -0.374 |
| GP0c | -0.075 | -0.138 |
| NOD | 0.2 | 0.812 |
| NZO | -0.15 | 0.012 |
| PWK | 0.279 | 0.347 |
| H37Rv_KO_CtpC | -0.497 | -0.465 |
| H37Rv_KO_CtpD | -0.614 | 0.501 |
| H37Rv_KO_Rv1272 | 0.157 | 1.286 |
| H37Rv_KO_SugABC | 0.765 | 0.428 |
| H37Rv_KO_MbtN | -0.561 | 0.066 |
| Trans05 | 1.492 | 0.423 |
| macrophage_unactivated | -0.606 | -0.076 |
| IL1 | -0.644 | -0.641 |
| Rapamycin | 0.028 | 0.055 |
| Tcell | -0.639 | -0.394 |
| GMCSF | -0.65 | -0.05 |
| IFNab | -0.221 | -0.357 |
| IFNg | -0.738 | 0.206 |
| IFNg_GMCSF1 | 0.069 | 1.178 |
| Rv1432_day32 | 0.145 | 0.631 |
| Rv1565c_day32 | 0.559 | 0.605 |
| secA2_input | -0.565 | -0.775 |
| delta_Rv3594 | 0.257 | 0.083 |
| delta_Rv3717 | 0.254 | -0.186 |
| delta_Rv3811 | -0.12 | 0.311 |
| delta_Rv0954 | 0.411 | 0.075 |
| PonA1 | 1.002 | 0.5 |
| EccD1_KO | -0.727 | 0.234 |
| EspI_KO | -0.231 | 0.482 |
| PE35_KO | -1.123 | 0.846 |
| PPE68_KO | -1.385 | 0.419 |
| glycerol2 | 0.682 | 1.092 |
| lignocerate | 0.867 | 0.822 |
| oleate | 1.969 | 1.143 |
| phosphatidylcholine | 0.885 | 1.049 |
| acetate | 0.248 | 0.007 |
| glucAc | 0.352 | -0.026 |
| Rv0950ko | -0.781 | 0.223 |
| Rv1096ko | -0.54 | -0.63 |
| Rv3684ko | -0.337 | -0.082 |
| delta_otsA_trehalose | -0.886 | 0.216 |