Top 10 genes with highest correlation to Rv2602/vapC41:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3323c/moaX | (cc=0.5054) | info on Rv3323c/moaX |
| Rv1489A/- | (cc=0.4764) | info on Rv1489A/- |
| Rv2077c/- | (cc=0.4682) | info on Rv2077c/- |
| Rv0342/iniA | (cc=0.4672) | info on Rv0342/iniA |
| Rv2208/cobS | (cc=0.4656) | info on Rv2208/cobS |
| Rv0843/- | (cc=0.4639) | info on Rv0843/- |
| Rv2954c/- | (cc=0.4588) | info on Rv2954c/- |
| Rv3435c/- | (cc=0.4436) | info on Rv3435c/- |
| Rv0160c/PE4 | (cc=0.4397) | info on Rv0160c/PE4 |
| Rv0872c/PE_PGRS15 | (cc=0.438) | info on Rv0872c/PE_PGRS15 |
Correlation of Rv2602/vapC41 with Rv2208/cobS
Normalized LFCs for Rv2602/vapC41:
(description and provenance of datasets)
| Rv2602/vapC41 | Rv2208/cobS | |
| Fe_supp_jason_reseq | 0.177 | 0.991 |
| low_pH_jason_reseq | -1.456 | -0.136 |
| NO_jason_reseq | -0.507 | -1.113 |
| B6_jason_reseq | -0.245 | -0.591 |
| MHCII_jason_reseq | 0.183 | -0.163 |
| Isoniazid02 | -1.794 | -1.937 |
| Rifampicin4 | 0.403 | -1.359 |
| Ethambutol3 | -1.769 | -2.013 |
| Meropenem3 | -1.022 | -2.443 |
| Vancomycin16 | -0.836 | -1.846 |
| Rv2680_day32 | 0.05 | -0.208 |
| H37Rv_KO_MarP | 0.052 | 0.104 |
| hypoxia_3wks | -0.227 | -0.666 |
| hypoxia_6wks | -0.299 | -1.631 |
| glycerol | -1.008 | 1.29 |
| cholesterol | 0.234 | 0.356 |
| AJ | 0.837 | 1.05 |
| Bibs02 | -0.543 | 0.813 |
| Bibs02c | 0.191 | 0.788 |
| BL6 | 0.597 | 0.32 |
| BL6a | -0.096 | -0.05 |
| BXD01 | 0.043 | -0.745 |
| BXD010 | -0.593 | -0.118 |
| BXD011 | 0.0 | -1.076 |
| BXD03 | -0.346 | -1.031 |
| BXD04 | 0.19 | -0.486 |
| BXD05 | -0.379 | -1.745 |
| BXD06 | 0.042 | -0.363 |
| BXD07 | -0.134 | -0.544 |
| BXD08 | 0.194 | -0.677 |
| BXD09 | -0.072 | -0.716 |
| CAST | -0.656 | -0.781 |
| CCcont | -0.048 | 0.055 |
| DS01 | -0.452 | 0.556 |
| DS02 | -0.44 | 0.307 |
| DS04 | 0.649 | 1.016 |
| DS0c | -0.195 | -0.892 |
| GP01 | -0.556 | -0.443 |
| GP02 | -0.242 | -1.282 |
| GP0c | -0.075 | 0.28 |
| NOD | 0.2 | -0.334 |
| NZO | -0.15 | 0.146 |
| PWK | 0.279 | 0.402 |
| H37Rv_KO_CtpC | -0.497 | 1.197 |
| H37Rv_KO_CtpD | -0.614 | -1.952 |
| H37Rv_KO_Rv1272 | 0.157 | -0.936 |
| H37Rv_KO_SugABC | 0.765 | 0.084 |
| H37Rv_KO_MbtN | -0.561 | 0.594 |
| Trans05 | 1.492 | -2.013 |
| macrophage_unactivated | -0.606 | -1.989 |
| IL1 | -0.644 | -0.955 |
| Rapamycin | 0.028 | -0.43 |
| Tcell | -0.639 | -0.958 |
| GMCSF | -0.65 | -1.486 |
| IFNab | -0.221 | -0.067 |
| IFNg | -0.738 | -1.593 |
| IFNg_GMCSF1 | 0.069 | 0.399 |
| Rv1432_day32 | 0.145 | 0.608 |
| Rv1565c_day32 | 0.559 | -0.218 |
| secA2_input | -0.565 | -0.704 |
| delta_Rv3594 | 0.257 | 1.019 |
| delta_Rv3717 | 0.254 | 1.136 |
| delta_Rv3811 | -0.12 | 0.807 |
| delta_Rv0954 | 0.411 | 0.04 |
| PonA1 | 1.002 | 0.963 |
| EccD1_KO | -0.727 | -0.257 |
| EspI_KO | -0.231 | -0.411 |
| PE35_KO | -1.123 | -0.995 |
| PPE68_KO | -1.385 | -0.793 |
| glycerol2 | 0.682 | 1.359 |
| lignocerate | 0.867 | 2.322 |
| oleate | 1.969 | 1.375 |
| phosphatidylcholine | 0.885 | 2.274 |
| acetate | 0.248 | 2.462 |
| glucAc | 0.352 | 2.004 |
| Rv0950ko | -0.781 | -0.513 |
| Rv1096ko | -0.54 | 1.161 |
| Rv3684ko | -0.337 | 0.783 |
| delta_otsA_trehalose | -0.886 | 0.778 |