Top 10 genes with highest correlation to Rv2536/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv0174/mce1F | (cc=0.5656) | info on Rv0174/mce1F |
Rv0169/mce1A | (cc=0.5413) | info on Rv0169/mce1A |
Rv0176/- | (cc=0.5043) | info on Rv0176/- |
Rv0173/lprK | (cc=0.5043) | info on Rv0173/lprK |
Rv1490/- | (cc=0.4993) | info on Rv1490/- |
Rv0505c/serB1 | (cc=0.4875) | info on Rv0505c/serB1 |
Rv3421c/- | (cc=0.4865) | info on Rv3421c/- |
Rv0175/- | (cc=0.4703) | info on Rv0175/- |
Rv3419c/gcp | (cc=0.4677) | info on Rv3419c/gcp |
Rv0170/mce1B | (cc=0.4565) | info on Rv0170/mce1B |
Correlation of Rv2536/- with Rv0176/-
Normalized LFCs for Rv2536/-:
(description and provenance of datasets)
Rv2536/- | Rv0176/- | |
Fe_supp_jason_reseq | -0.09 | -0.81 |
low_pH_jason_reseq | -0.166 | 1.268 |
NO_jason_reseq | 1.147 | 2.659 |
B6_jason_reseq | -1.389 | 0.249 |
MHCII_jason_reseq | -1.901 | -1.942 |
Isoniazid02 | -0.332 | 0.237 |
Rifampicin4 | 1.776 | 1.803 |
Ethambutol3 | 0.124 | 1.617 |
Meropenem3 | 0.998 | 2.131 |
Vancomycin16 | 2.21 | 1.963 |
Rv2680_day32 | -0.506 | 0.076 |
H37Rv_KO_MarP | -1.514 | 0.896 |
hypoxia_3wks | 0.367 | 1.878 |
hypoxia_6wks | 0.468 | 2.24 |
glycerol | 1.393 | 1.777 |
cholesterol | 0.961 | 5.769 |
AJ | 0.568 | 0.476 |
Bibs02 | 0.405 | -3.257 |
Bibs02c | -1.435 | -1.758 |
BL6 | 1.279 | -0.548 |
BL6a | -0.248 | -0.72 |
BXD01 | 0.627 | 1.566 |
BXD010 | 0.774 | 0.482 |
BXD011 | 0.916 | 1.161 |
BXD03 | 0.966 | 1.029 |
BXD04 | 2.174 | 0.753 |
BXD05 | 1.31 | 1.464 |
BXD06 | 1.043 | 0.728 |
BXD07 | 1.114 | 1.32 |
BXD08 | 0.416 | 1.071 |
BXD09 | 0.786 | 1.447 |
CAST | -0.165 | -1.251 |
CCcont | 0.5 | 0.185 |
DS01 | -0.245 | -1.403 |
DS02 | 0.124 | -0.181 |
DS04 | 0.038 | -0.496 |
DS0c | -1.18 | -2.382 |
GP01 | -0.818 | -1.24 |
GP02 | -1.542 | -0.236 |
GP0c | -0.507 | -0.068 |
NOD | 1.217 | -0.864 |
NZO | 0.152 | 1.371 |
PWK | -0.793 | -1.378 |
H37Rv_KO_CtpC | 0.667 | -0.824 |
H37Rv_KO_CtpD | 0.708 | 0.972 |
H37Rv_KO_Rv1272 | 1.673 | -0.441 |
H37Rv_KO_SugABC | 2.392 | 0.956 |
H37Rv_KO_MbtN | 1.121 | 1.027 |
Trans05 | 0.984 | -0.173 |
macrophage_unactivated | -1.6 | -0.821 |
IL1 | -0.789 | -1.195 |
Rapamycin | -0.577 | -2.102 |
Tcell | -0.707 | -1.127 |
GMCSF | -1.009 | -0.523 |
IFNab | -1.427 | -0.109 |
IFNg | -0.136 | 0.567 |
IFNg_GMCSF1 | -0.5 | -0.434 |
Rv1432_day32 | -0.875 | -0.3 |
Rv1565c_day32 | -0.534 | -1.995 |
secA2_input | -0.542 | -3.073 |
delta_Rv3594 | 0.668 | 1.031 |
delta_Rv3717 | 0.773 | 1.739 |
delta_Rv3811 | 0.0 | 0.807 |
delta_Rv0954 | 0.266 | 1.454 |
PonA1 | 1.278 | 0.615 |
EccD1_KO | 0.171 | -0.444 |
EspI_KO | 0.026 | -0.168 |
PE35_KO | 0.578 | -0.28 |
PPE68_KO | 0.608 | -0.022 |
glycerol2 | -1.094 | -0.123 |
lignocerate | -0.268 | -2.384 |
oleate | 0.299 | 1.004 |
phosphatidylcholine | 0.773 | -0.77 |
acetate | 0.249 | 1.162 |
glucAc | 0.462 | 0.318 |
Rv0950ko | 0.461 | -0.286 |
Rv1096ko | 0.335 | -1.318 |
Rv3684ko | 0.124 | 0.314 |
delta_otsA_trehalose | -0.014 | 0.337 |