Top 10 genes with highest correlation to Rv2434c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2455c/- | (cc=0.5506) | info on Rv2455c/- |
| Rv2454c/- | (cc=0.4947) | info on Rv2454c/- |
| Rv2393/che1 | (cc=0.4817) | info on Rv2393/che1 |
| Rv1208/gpgS | (cc=0.4796) | info on Rv1208/gpgS |
| Rv2282c/- | (cc=0.4689) | info on Rv2282c/- |
| Rv2847c/cysG | (cc=0.445) | info on Rv2847c/cysG |
| Rv2381c/mbtD | (cc=0.4385) | info on Rv2381c/mbtD |
| Rv2432c/- | (cc=0.4379) | info on Rv2432c/- |
| Rv2840c/- | (cc=0.4309) | info on Rv2840c/- |
| Rv2761c/hsdS | (cc=0.4269) | info on Rv2761c/hsdS |
Correlation of Rv2434c/- with Rv2381c/mbtD
Normalized LFCs for Rv2434c/-:
(description and provenance of datasets)
| Rv2434c/- | Rv2381c/mbtD | |
| Fe_supp_jason_reseq | -0.598 | 0.766 |
| low_pH_jason_reseq | 0.463 | 0.979 |
| NO_jason_reseq | -0.302 | 0.0 |
| B6_jason_reseq | 0.586 | 0.0 |
| MHCII_jason_reseq | 0.399 | 0.0 |
| Isoniazid02 | 1.336 | 0.723 |
| Rifampicin4 | 0.087 | 0.634 |
| Ethambutol3 | -0.122 | 0.285 |
| Meropenem3 | 0.147 | 0.446 |
| Vancomycin16 | 0.247 | 0.621 |
| Rv2680_day32 | -0.5 | -0.131 |
| H37Rv_KO_MarP | 0.291 | 0.615 |
| hypoxia_3wks | -0.259 | -1.511 |
| hypoxia_6wks | 0.213 | -0.791 |
| glycerol | -0.512 | -0.168 |
| cholesterol | -1.026 | 0.216 |
| AJ | -0.839 | -0.193 |
| Bibs02 | 0.579 | -0.502 |
| Bibs02c | 0.561 | -0.365 |
| BL6 | 0.758 | -0.343 |
| BL6a | 0.063 | -0.165 |
| BXD01 | 0.265 | -0.358 |
| BXD010 | 0.294 | -0.352 |
| BXD011 | 0.079 | -0.35 |
| BXD03 | -0.52 | -0.371 |
| BXD04 | -0.476 | -0.34 |
| BXD05 | 0.238 | -0.369 |
| BXD06 | 0.219 | -0.111 |
| BXD07 | -0.295 | -0.38 |
| BXD08 | 0.18 | -0.365 |
| BXD09 | 0.69 | -0.386 |
| CAST | 0.037 | 0.0 |
| CCcont | 0.4 | 0.0 |
| DS01 | 0.775 | 1.514 |
| DS02 | 1.744 | 1.196 |
| DS04 | 1.244 | 0.0 |
| DS0c | 0.859 | 0.0 |
| GP01 | 0.358 | -0.271 |
| GP02 | 0.089 | -0.228 |
| GP0c | -0.47 | -0.357 |
| NOD | 0.036 | 0.0 |
| NZO | -0.273 | 0.155 |
| PWK | -0.199 | 0.152 |
| H37Rv_KO_CtpC | 0.552 | 0.0 |
| H37Rv_KO_CtpD | 0.0 | -0.348 |
| H37Rv_KO_Rv1272 | -0.791 | -0.387 |
| H37Rv_KO_SugABC | -0.583 | -0.272 |
| H37Rv_KO_MbtN | -0.326 | -0.283 |
| Trans05 | -0.386 | -0.359 |
| macrophage_unactivated | 0.126 | 0.83 |
| IL1 | 0.231 | 0.409 |
| Rapamycin | 0.0 | 0.0 |
| Tcell | 0.495 | 1.58 |
| GMCSF | 0.206 | 0.0 |
| IFNab | -0.314 | 0.0 |
| IFNg | 0.775 | 0.0 |
| IFNg_GMCSF1 | 0.361 | 0.0 |
| Rv1432_day32 | -0.679 | -0.18 |
| Rv1565c_day32 | 0.051 | 1.579 |
| secA2_input | -1.99 | 0.0 |
| delta_Rv3594 | -0.953 | -0.717 |
| delta_Rv3717 | -0.598 | -0.59 |
| delta_Rv3811 | -0.706 | -0.87 |
| delta_Rv0954 | -0.482 | -0.606 |
| PonA1 | 0.457 | 0.851 |
| EccD1_KO | 0.329 | 0.921 |
| EspI_KO | 1.258 | 0.285 |
| PE35_KO | 1.569 | 1.059 |
| PPE68_KO | 1.568 | 1.161 |
| glycerol2 | 0.137 | 0.369 |
| lignocerate | 0.357 | 0.591 |
| oleate | -0.213 | 0.196 |
| phosphatidylcholine | -0.028 | 0.368 |
| acetate | 0.346 | 0.63 |
| glucAc | 0.141 | 0.877 |
| Rv0950ko | -0.522 | -0.793 |
| Rv1096ko | -0.217 | 0.0 |
| Rv3684ko | -0.075 | 0.255 |
| delta_otsA_trehalose | -0.214 | 0.336 |