Top 10 genes with highest correlation to Rv2411c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2409c/- | (cc=0.8344) | info on Rv2409c/- |
| Rv2410c/- | (cc=0.7193) | info on Rv2410c/- |
| Rv3616c/espA | (cc=0.6796) | info on Rv3616c/espA |
| Rv3614c/espD | (cc=0.6718) | info on Rv3614c/espD |
| Rv0757/phoP | (cc=0.6425) | info on Rv0757/phoP |
| Rv3615c/espC | (cc=0.6271) | info on Rv3615c/espC |
| Rv3883c/mycP1 | (cc=0.6237) | info on Rv3883c/mycP1 |
| Rv3882c/eccE1 | (cc=0.6211) | info on Rv3882c/eccE1 |
| Rv3058c/- | (cc=0.6094) | info on Rv3058c/- |
| Rv3870/eccCa1 | (cc=0.6022) | info on Rv3870/eccCa1 |
Correlation of Rv2411c/- with Rv2409c/-
Normalized LFCs for Rv2411c/-:
(description and provenance of datasets)
| Rv2411c/- | Rv2409c/- | |
| Fe_supp_jason_reseq | 1.157 | 1.334 |
| low_pH_jason_reseq | -0.182 | -1.134 |
| NO_jason_reseq | -1.189 | -1.42 |
| B6_jason_reseq | -0.857 | 0.546 |
| MHCII_jason_reseq | -0.194 | 0.416 |
| Isoniazid02 | -1.096 | -2.007 |
| Rifampicin4 | -1.473 | -0.455 |
| Ethambutol3 | -0.058 | -0.563 |
| Meropenem3 | -0.489 | 0.128 |
| Vancomycin16 | -0.422 | -0.462 |
| Rv2680_day32 | -0.123 | -0.039 |
| H37Rv_KO_MarP | 1.51 | 1.03 |
| hypoxia_3wks | 0.072 | -0.686 |
| hypoxia_6wks | -0.215 | -0.612 |
| glycerol | 0.351 | 0.483 |
| cholesterol | 0.066 | 0.451 |
| AJ | -1.034 | -0.983 |
| Bibs02 | -1.518 | -1.805 |
| Bibs02c | -1.737 | -0.732 |
| BL6 | -0.572 | -1.081 |
| BL6a | -1.553 | -1.116 |
| BXD01 | -0.595 | -0.392 |
| BXD010 | -0.571 | -1.217 |
| BXD011 | -0.983 | -0.582 |
| BXD03 | -0.908 | -1.146 |
| BXD04 | -1.102 | -1.447 |
| BXD05 | -0.791 | -1.231 |
| BXD06 | -0.951 | -1.131 |
| BXD07 | -0.749 | -1.446 |
| BXD08 | -0.831 | -0.684 |
| BXD09 | -1.045 | -1.191 |
| CAST | -1.018 | -1.078 |
| CCcont | -0.558 | -0.407 |
| DS01 | -2.51 | -2.467 |
| DS02 | -2.787 | -3.088 |
| DS04 | -1.923 | -3.18 |
| DS0c | -2.054 | -1.479 |
| GP01 | -0.926 | -1.348 |
| GP02 | -0.968 | 0.041 |
| GP0c | -0.654 | -0.429 |
| NOD | -0.583 | 0.361 |
| NZO | -0.597 | -0.581 |
| PWK | -1.023 | -1.105 |
| H37Rv_KO_CtpC | -0.293 | 1.003 |
| H37Rv_KO_CtpD | -0.264 | -1.181 |
| H37Rv_KO_Rv1272 | -0.916 | 0.0 |
| H37Rv_KO_SugABC | 0.047 | -1.406 |
| H37Rv_KO_MbtN | -0.137 | -0.777 |
| Trans05 | -0.678 | -0.272 |
| macrophage_unactivated | -0.679 | 0.155 |
| IL1 | 1.308 | 1.385 |
| Rapamycin | 1.329 | 1.292 |
| Tcell | -0.042 | 0.43 |
| GMCSF | -0.702 | -0.066 |
| IFNab | -0.937 | -1.07 |
| IFNg | 0.404 | 1.0 |
| IFNg_GMCSF1 | 0.408 | -0.456 |
| Rv1432_day32 | 0.116 | -0.194 |
| Rv1565c_day32 | 0.31 | 0.611 |
| secA2_input | 1.158 | 2.143 |
| delta_Rv3594 | 0.243 | -0.22 |
| delta_Rv3717 | -0.427 | -0.688 |
| delta_Rv3811 | 0.101 | -0.29 |
| delta_Rv0954 | -0.264 | -0.23 |
| PonA1 | -0.23 | -0.286 |
| EccD1_KO | 0.072 | 0.089 |
| EspI_KO | 0.81 | 0.114 |
| PE35_KO | 0.324 | 0.557 |
| PPE68_KO | 0.211 | 0.65 |
| glycerol2 | 2.476 | 2.169 |
| lignocerate | 1.506 | 1.957 |
| oleate | 1.742 | 0.988 |
| phosphatidylcholine | 1.84 | 1.562 |
| acetate | -0.093 | 0.037 |
| glucAc | -0.648 | -0.272 |
| Rv0950ko | 0.398 | 0.211 |
| Rv1096ko | -0.38 | -0.112 |
| Rv3684ko | -0.288 | -0.72 |
| delta_otsA_trehalose | -0.422 | -1.072 |