Top 10 genes with highest correlation to Rv2408/PE24:
update plot | correlation | link to info on gene |
---|---|---|
Rv2577/- | (cc=0.56) | info on Rv2577/- |
Rv2459/- | (cc=0.5404) | info on Rv2459/- |
Rv1038c/esxJ | (cc=0.4985) | info on Rv1038c/esxJ |
Rv2875/mpt70 | (cc=0.4955) | info on Rv2875/mpt70 |
Rv2409c/- | (cc=0.4818) | info on Rv2409c/- |
Rv2634c/PE_PGRS46 | (cc=0.4728) | info on Rv2634c/PE_PGRS46 |
Rv0873/fadE10 | (cc=0.4723) | info on Rv0873/fadE10 |
Rv3192/- | (cc=0.4637) | info on Rv3192/- |
Rv1704c/cycA | (cc=0.4625) | info on Rv1704c/cycA |
Rv0754/PE_PGRS11 | (cc=0.4594) | info on Rv0754/PE_PGRS11 |
Correlation of Rv2408/PE24 with Rv1704c/cycA
Normalized LFCs for Rv2408/PE24:
(description and provenance of datasets)
Rv2408/PE24 | Rv1704c/cycA | |
Fe_supp_jason_reseq | 0.385 | 0.592 |
low_pH_jason_reseq | -1.752 | -0.597 |
NO_jason_reseq | -1.016 | -0.176 |
B6_jason_reseq | -0.122 | 0.185 |
MHCII_jason_reseq | 0.741 | 0.454 |
Isoniazid02 | -0.696 | 0.092 |
Rifampicin4 | -0.198 | -0.219 |
Ethambutol3 | -0.822 | -0.193 |
Meropenem3 | -0.979 | 0.017 |
Vancomycin16 | -0.462 | -0.058 |
Rv2680_day32 | -0.037 | -1.102 |
H37Rv_KO_MarP | 0.413 | 0.0 |
hypoxia_3wks | -0.195 | -0.335 |
hypoxia_6wks | -0.587 | 0.063 |
glycerol | 0.051 | -0.168 |
cholesterol | 0.357 | -0.557 |
AJ | -0.113 | -0.108 |
Bibs02 | 0.062 | -0.502 |
Bibs02c | -0.065 | 0.032 |
BL6 | 0.094 | -0.168 |
BL6a | 0.026 | -0.188 |
BXD01 | -0.1 | -0.559 |
BXD010 | -0.147 | -0.393 |
BXD011 | -0.366 | -0.436 |
BXD03 | -0.228 | -0.825 |
BXD04 | 0.161 | 0.19 |
BXD05 | 0.155 | -0.682 |
BXD06 | -0.128 | -0.314 |
BXD07 | -0.249 | -0.615 |
BXD08 | 0.314 | -0.111 |
BXD09 | -0.26 | -0.349 |
CAST | -0.437 | -0.349 |
CCcont | 0.206 | -0.278 |
DS01 | -0.214 | 0.238 |
DS02 | 0.038 | -0.23 |
DS04 | -0.042 | 0.365 |
DS0c | -0.526 | 0.286 |
GP01 | 0.382 | 0.143 |
GP02 | 0.773 | 0.72 |
GP0c | -0.26 | -0.481 |
NOD | 0.086 | 2.455 |
NZO | -0.062 | -0.061 |
PWK | -0.476 | -0.04 |
H37Rv_KO_CtpC | 0.035 | 0.193 |
H37Rv_KO_CtpD | 0.61 | 0.336 |
H37Rv_KO_Rv1272 | 0.404 | 0.0 |
H37Rv_KO_SugABC | -1.885 | -1.253 |
H37Rv_KO_MbtN | -0.428 | 0.398 |
Trans05 | -0.041 | 0.558 |
macrophage_unactivated | -0.193 | -0.385 |
IL1 | 0.475 | -0.362 |
Rapamycin | 0.565 | 0.095 |
Tcell | -0.088 | -0.14 |
GMCSF | -0.539 | 0.349 |
IFNab | -0.254 | -1.17 |
IFNg | 0.158 | 0.029 |
IFNg_GMCSF1 | -0.393 | 0.258 |
Rv1432_day32 | 1.288 | 0.451 |
Rv1565c_day32 | 0.063 | -0.158 |
secA2_input | 0.393 | -0.501 |
delta_Rv3594 | -0.021 | 0.168 |
delta_Rv3717 | -0.638 | 0.194 |
delta_Rv3811 | -0.107 | 0.504 |
delta_Rv0954 | 0.245 | 0.523 |
PonA1 | -0.074 | 0.32 |
EccD1_KO | 1.125 | 0.493 |
EspI_KO | 0.819 | 0.944 |
PE35_KO | 1.286 | 1.278 |
PPE68_KO | 0.851 | 1.129 |
glycerol2 | 0.8 | 0.041 |
lignocerate | 1.162 | 0.623 |
oleate | 0.53 | -0.535 |
phosphatidylcholine | 0.866 | 0.384 |
acetate | 0.131 | 0.231 |
glucAc | 0.503 | 0.934 |
Rv0950ko | 0.449 | 0.712 |
Rv1096ko | -0.253 | 0.28 |
Rv3684ko | -0.825 | -0.468 |
delta_otsA_trehalose | 0.527 | 0.244 |