Top 10 genes with highest correlation to Rv2398c/cysW:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1286/cysN | (cc=0.7099) | info on Rv1286/cysN |
| Rv0805/- | (cc=0.6369) | info on Rv0805/- |
| Rv2569c/- | (cc=0.6244) | info on Rv2569c/- |
| Rv0930/pstA1 | (cc=0.5991) | info on Rv0930/pstA1 |
| Rv2567/- | (cc=0.5913) | info on Rv2567/- |
| Rv0820/phoT | (cc=0.587) | info on Rv0820/phoT |
| Rv0928/pstS3 | (cc=0.5855) | info on Rv0928/pstS3 |
| Rv0818/- | (cc=0.5851) | info on Rv0818/- |
| Rv0929/pstC2 | (cc=0.5795) | info on Rv0929/pstC2 |
| Rv2582/ppiB | (cc=0.5764) | info on Rv2582/ppiB |
Correlation of Rv2398c/cysW with Rv0928/pstS3
Normalized LFCs for Rv2398c/cysW:
(description and provenance of datasets)
| Rv2398c/cysW | Rv0928/pstS3 | |
| Fe_supp_jason_reseq | -0.559 | -3.391 |
| low_pH_jason_reseq | 2.469 | 1.549 |
| NO_jason_reseq | -0.929 | -3.363 |
| B6_jason_reseq | 1.243 | 0.406 |
| MHCII_jason_reseq | -1.175 | 0.372 |
| Isoniazid02 | -0.627 | 0.156 |
| Rifampicin4 | -0.26 | -4.059 |
| Ethambutol3 | 0.263 | -0.989 |
| Meropenem3 | -0.593 | -2.653 |
| Vancomycin16 | 0.239 | -2.26 |
| Rv2680_day32 | 0.0 | 3.982 |
| H37Rv_KO_MarP | -1.317 | -2.74 |
| hypoxia_3wks | -0.371 | -3.413 |
| hypoxia_6wks | 1.462 | 1.128 |
| glycerol | 0.709 | 4.051 |
| cholesterol | 0.0 | 3.767 |
| AJ | 0.637 | 1.99 |
| Bibs02 | 0.0 | 1.819 |
| Bibs02c | 0.0 | 2.23 |
| BL6 | 0.125 | 5.545 |
| BL6a | 0.696 | 6.0 |
| BXD01 | 2.505 | 6.0 |
| BXD010 | 0.543 | 6.0 |
| BXD011 | 0.243 | 6.0 |
| BXD03 | 1.687 | 5.608 |
| BXD04 | 2.08 | 6.0 |
| BXD05 | 1.109 | 6.0 |
| BXD06 | 1.898 | 6.0 |
| BXD07 | 1.003 | 6.0 |
| BXD08 | 3.201 | 6.0 |
| BXD09 | 0.943 | 6.0 |
| CAST | 2.563 | 2.334 |
| CCcont | 0.829 | 3.228 |
| DS01 | 0.0 | 0.0 |
| DS02 | 0.0 | 0.101 |
| DS04 | 0.0 | 2.0 |
| DS0c | 0.596 | 1.053 |
| GP01 | 0.0 | 5.887 |
| GP02 | 0.0 | 5.592 |
| GP0c | 0.248 | 6.0 |
| NOD | 1.507 | 0.649 |
| NZO | 0.199 | 2.227 |
| PWK | 0.196 | 4.575 |
| H37Rv_KO_CtpC | 0.309 | 3.13 |
| H37Rv_KO_CtpD | 0.241 | 1.414 |
| H37Rv_KO_Rv1272 | 0.0 | 4.357 |
| H37Rv_KO_SugABC | 0.099 | 3.955 |
| H37Rv_KO_MbtN | 0.633 | 6.0 |
| Trans05 | 3.198 | 5.513 |
| macrophage_unactivated | -0.761 | -2.632 |
| IL1 | -1.124 | -3.073 |
| Rapamycin | -0.74 | -3.492 |
| Tcell | -0.785 | -2.47 |
| GMCSF | -1.001 | -3.11 |
| IFNab | 0.623 | 2.618 |
| IFNg | -1.013 | -5.161 |
| IFNg_GMCSF1 | -0.757 | -4.672 |
| Rv1432_day32 | 0.0 | 6.0 |
| Rv1565c_day32 | 0.0 | -0.314 |
| secA2_input | -2.027 | -1.969 |
| delta_Rv3594 | -1.689 | -0.055 |
| delta_Rv3717 | -2.648 | 2.024 |
| delta_Rv3811 | -4.054 | 0.581 |
| delta_Rv0954 | -1.902 | -3.635 |
| PonA1 | -2.428 | -3.624 |
| EccD1_KO | -3.147 | -2.447 |
| EspI_KO | -3.246 | -1.258 |
| PE35_KO | 2.374 | -0.557 |
| PPE68_KO | 0.653 | -1.51 |
| glycerol2 | -2.028 | -4.89 |
| lignocerate | -1.469 | -1.422 |
| oleate | -1.874 | -3.927 |
| phosphatidylcholine | -1.689 | -2.553 |
| acetate | -0.637 | -0.17 |
| glucAc | -1.034 | -0.089 |
| Rv0950ko | -2.527 | -3.986 |
| Rv1096ko | -1.915 | 1.674 |
| Rv3684ko | -1.955 | 0.082 |
| delta_otsA_trehalose | 1.3 | -0.532 |