Top 10 genes with highest correlation to Rv2398c/cysW:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1286/cysN | (cc=0.7099) | info on Rv1286/cysN |
| Rv0805/- | (cc=0.6369) | info on Rv0805/- |
| Rv2569c/- | (cc=0.6244) | info on Rv2569c/- |
| Rv0930/pstA1 | (cc=0.5991) | info on Rv0930/pstA1 |
| Rv2567/- | (cc=0.5913) | info on Rv2567/- |
| Rv0820/phoT | (cc=0.587) | info on Rv0820/phoT |
| Rv0928/pstS3 | (cc=0.5855) | info on Rv0928/pstS3 |
| Rv0818/- | (cc=0.5851) | info on Rv0818/- |
| Rv0929/pstC2 | (cc=0.5795) | info on Rv0929/pstC2 |
| Rv2582/ppiB | (cc=0.5764) | info on Rv2582/ppiB |
Correlation of Rv2398c/cysW with Rv1286/cysN
Normalized LFCs for Rv2398c/cysW:
(description and provenance of datasets)
| Rv2398c/cysW | Rv1286/cysN | |
| Fe_supp_jason_reseq | -0.559 | 1.579 |
| low_pH_jason_reseq | 2.469 | 3.803 |
| NO_jason_reseq | -0.929 | 1.244 |
| B6_jason_reseq | 1.243 | -0.941 |
| MHCII_jason_reseq | -1.175 | -0.829 |
| Isoniazid02 | -0.627 | -0.351 |
| Rifampicin4 | -0.26 | 0.812 |
| Ethambutol3 | 0.263 | 0.841 |
| Meropenem3 | -0.593 | 0.464 |
| Vancomycin16 | 0.239 | 0.674 |
| Rv2680_day32 | 0.0 | -0.344 |
| H37Rv_KO_MarP | -1.317 | -0.988 |
| hypoxia_3wks | -0.371 | -1.483 |
| hypoxia_6wks | 1.462 | -0.958 |
| glycerol | 0.709 | 0.202 |
| cholesterol | 0.0 | 0.0 |
| AJ | 0.637 | 0.0 |
| Bibs02 | 0.0 | 0.183 |
| Bibs02c | 0.0 | 0.0 |
| BL6 | 0.125 | 0.694 |
| BL6a | 0.696 | 0.377 |
| BXD01 | 2.505 | 1.496 |
| BXD010 | 0.543 | 0.244 |
| BXD011 | 0.243 | 0.448 |
| BXD03 | 1.687 | 1.115 |
| BXD04 | 2.08 | 0.686 |
| BXD05 | 1.109 | 0.135 |
| BXD06 | 1.898 | 0.895 |
| BXD07 | 1.003 | 0.38 |
| BXD08 | 3.201 | 1.031 |
| BXD09 | 0.943 | 0.494 |
| CAST | 2.563 | 0.0 |
| CCcont | 0.829 | 1.999 |
| DS01 | 0.0 | 0.45 |
| DS02 | 0.0 | 0.0 |
| DS04 | 0.0 | 0.0 |
| DS0c | 0.596 | 0.0 |
| GP01 | 0.0 | 0.188 |
| GP02 | 0.0 | 0.083 |
| GP0c | 0.248 | 0.721 |
| NOD | 1.507 | 0.0 |
| NZO | 0.199 | 0.199 |
| PWK | 0.196 | 0.831 |
| H37Rv_KO_CtpC | 0.309 | 0.688 |
| H37Rv_KO_CtpD | 0.241 | 1.103 |
| H37Rv_KO_Rv1272 | 0.0 | 0.141 |
| H37Rv_KO_SugABC | 0.099 | 0.0 |
| H37Rv_KO_MbtN | 0.633 | 0.362 |
| Trans05 | 3.198 | 0.642 |
| macrophage_unactivated | -0.761 | 0.761 |
| IL1 | -1.124 | -0.409 |
| Rapamycin | -0.74 | 0.0 |
| Tcell | -0.785 | 0.0 |
| GMCSF | -1.001 | 0.0 |
| IFNab | 0.623 | 0.381 |
| IFNg | -1.013 | -0.369 |
| IFNg_GMCSF1 | -0.757 | 0.0 |
| Rv1432_day32 | 0.0 | -0.819 |
| Rv1565c_day32 | 0.0 | -1.73 |
| secA2_input | -2.027 | -1.738 |
| delta_Rv3594 | -1.689 | -2.164 |
| delta_Rv3717 | -2.648 | -3.253 |
| delta_Rv3811 | -4.054 | -2.543 |
| delta_Rv0954 | -1.902 | -2.297 |
| PonA1 | -2.428 | -0.979 |
| EccD1_KO | -3.147 | -1.983 |
| EspI_KO | -3.246 | -2.752 |
| PE35_KO | 2.374 | 2.129 |
| PPE68_KO | 0.653 | 0.726 |
| glycerol2 | -2.028 | -0.311 |
| lignocerate | -1.469 | -0.27 |
| oleate | -1.874 | -1.144 |
| phosphatidylcholine | -1.689 | -1.798 |
| acetate | -0.637 | 0.043 |
| glucAc | -1.034 | -0.229 |
| Rv0950ko | -2.527 | -0.778 |
| Rv1096ko | -1.915 | -0.953 |
| Rv3684ko | -1.955 | -1.762 |
| delta_otsA_trehalose | 1.3 | 0.107 |