Top 10 genes with highest correlation to Rv2331/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1516c/- | (cc=0.4543) | info on Rv1516c/- |
| Rv2332/mez | (cc=0.4452) | info on Rv2332/mez |
| Rv1528c/papA4 | (cc=0.442) | info on Rv1528c/papA4 |
| Rv2478c/- | (cc=0.4264) | info on Rv2478c/- |
| Rv0052/- | (cc=0.4213) | info on Rv0052/- |
| Rv2915c/- | (cc=0.4194) | info on Rv2915c/- |
| Rv0828c/- | (cc=0.4164) | info on Rv0828c/- |
| Rv0846c/- | (cc=0.4028) | info on Rv0846c/- |
| Rv1151c/- | (cc=0.4021) | info on Rv1151c/- |
| Rv2329c/narK1 | (cc=0.3937) | info on Rv2329c/narK1 |
Correlation of Rv2331/- with Rv2915c/-
Normalized LFCs for Rv2331/-:
(description and provenance of datasets)
| Rv2331/- | Rv2915c/- | |
| Fe_supp_jason_reseq | 0.069 | 0.384 |
| low_pH_jason_reseq | -0.589 | -0.564 |
| NO_jason_reseq | 0.961 | 0.612 |
| B6_jason_reseq | 1.602 | 0.963 |
| MHCII_jason_reseq | 0.799 | 1.18 |
| Isoniazid02 | 0.511 | -0.583 |
| Rifampicin4 | -1.338 | 0.447 |
| Ethambutol3 | -0.336 | -0.488 |
| Meropenem3 | -0.456 | 0.519 |
| Vancomycin16 | -0.348 | -0.255 |
| Rv2680_day32 | -2.26 | -0.528 |
| H37Rv_KO_MarP | -0.056 | 0.073 |
| hypoxia_3wks | 0.415 | 0.742 |
| hypoxia_6wks | 0.357 | 0.651 |
| glycerol | -1.695 | 0.138 |
| cholesterol | -0.126 | 0.216 |
| AJ | 0.486 | 0.709 |
| Bibs02 | 0.611 | -0.307 |
| Bibs02c | 0.259 | 0.365 |
| BL6 | 1.479 | -0.887 |
| BL6a | 0.343 | 0.059 |
| BXD01 | 0.273 | -0.79 |
| BXD010 | 0.322 | -0.556 |
| BXD011 | 0.333 | 0.133 |
| BXD03 | 0.273 | 0.092 |
| BXD04 | 1.132 | -0.386 |
| BXD05 | 0.766 | -0.014 |
| BXD06 | 0.774 | -0.305 |
| BXD07 | 0.66 | -0.828 |
| BXD08 | 0.353 | -0.185 |
| BXD09 | 0.443 | -0.375 |
| CAST | 0.739 | 0.24 |
| CCcont | -0.587 | -0.636 |
| DS01 | 0.0 | 0.52 |
| DS02 | 0.057 | 0.581 |
| DS04 | 0.586 | 0.356 |
| DS0c | 0.251 | 0.63 |
| GP01 | -3.176 | -1.518 |
| GP02 | -1.929 | -0.406 |
| GP0c | -3.762 | -1.971 |
| NOD | 1.593 | 0.099 |
| NZO | -0.27 | 0.144 |
| PWK | 0.043 | -0.05 |
| H37Rv_KO_CtpC | -1.923 | -0.644 |
| H37Rv_KO_CtpD | 0.579 | -1.357 |
| H37Rv_KO_Rv1272 | 0.946 | -0.287 |
| H37Rv_KO_SugABC | -0.053 | -0.264 |
| H37Rv_KO_MbtN | -2.132 | -1.728 |
| Trans05 | 0.629 | -0.481 |
| macrophage_unactivated | -1.326 | -0.578 |
| IL1 | 0.742 | 0.101 |
| Rapamycin | -0.175 | -0.681 |
| Tcell | 0.502 | -1.049 |
| GMCSF | -0.422 | -0.483 |
| IFNab | -1.956 | -0.846 |
| IFNg | -0.521 | -0.326 |
| IFNg_GMCSF1 | -0.666 | -0.154 |
| Rv1432_day32 | 0.314 | 0.562 |
| Rv1565c_day32 | -0.245 | 0.088 |
| secA2_input | 0.618 | 0.42 |
| delta_Rv3594 | 0.477 | -1.623 |
| delta_Rv3717 | -0.458 | -0.853 |
| delta_Rv3811 | 0.269 | -0.355 |
| delta_Rv0954 | 0.249 | -1.072 |
| PonA1 | 0.407 | -0.479 |
| EccD1_KO | 0.599 | 0.674 |
| EspI_KO | 0.519 | 1.352 |
| PE35_KO | 0.318 | 1.21 |
| PPE68_KO | 0.202 | 1.03 |
| glycerol2 | 0.207 | -0.151 |
| lignocerate | 0.81 | -0.574 |
| oleate | -0.362 | 0.349 |
| phosphatidylcholine | 0.861 | -0.021 |
| acetate | -0.18 | -0.331 |
| glucAc | 0.439 | -1.08 |
| Rv0950ko | -0.443 | -0.905 |
| Rv1096ko | -0.98 | -0.624 |
| Rv3684ko | -1.461 | -0.396 |
| delta_otsA_trehalose | -0.364 | -0.235 |