Top 10 genes with highest correlation to Rv2331/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1516c/- | (cc=0.4543) | info on Rv1516c/- |
| Rv2332/mez | (cc=0.4452) | info on Rv2332/mez |
| Rv1528c/papA4 | (cc=0.442) | info on Rv1528c/papA4 |
| Rv2478c/- | (cc=0.4264) | info on Rv2478c/- |
| Rv0052/- | (cc=0.4213) | info on Rv0052/- |
| Rv2915c/- | (cc=0.4194) | info on Rv2915c/- |
| Rv0828c/- | (cc=0.4164) | info on Rv0828c/- |
| Rv0846c/- | (cc=0.4028) | info on Rv0846c/- |
| Rv1151c/- | (cc=0.4021) | info on Rv1151c/- |
| Rv2329c/narK1 | (cc=0.3937) | info on Rv2329c/narK1 |
Correlation of Rv2331/- with Rv2329c/narK1
Normalized LFCs for Rv2331/-:
(description and provenance of datasets)
| Rv2331/- | Rv2329c/narK1 | |
| Fe_supp_jason_reseq | 0.069 | 0.739 |
| low_pH_jason_reseq | -0.589 | 0.366 |
| NO_jason_reseq | 0.961 | 0.144 |
| B6_jason_reseq | 1.602 | 0.91 |
| MHCII_jason_reseq | 0.799 | 0.881 |
| Isoniazid02 | 0.511 | -0.588 |
| Rifampicin4 | -1.338 | 0.073 |
| Ethambutol3 | -0.336 | -0.083 |
| Meropenem3 | -0.456 | -0.21 |
| Vancomycin16 | -0.348 | -0.385 |
| Rv2680_day32 | -2.26 | 0.344 |
| H37Rv_KO_MarP | -0.056 | 0.487 |
| hypoxia_3wks | 0.415 | -0.263 |
| hypoxia_6wks | 0.357 | -0.307 |
| glycerol | -1.695 | 0.023 |
| cholesterol | -0.126 | -0.317 |
| AJ | 0.486 | -0.212 |
| Bibs02 | 0.611 | -0.093 |
| Bibs02c | 0.259 | -0.664 |
| BL6 | 1.479 | -0.195 |
| BL6a | 0.343 | -0.397 |
| BXD01 | 0.273 | 0.043 |
| BXD010 | 0.322 | -0.187 |
| BXD011 | 0.333 | -0.365 |
| BXD03 | 0.273 | -0.429 |
| BXD04 | 1.132 | -0.155 |
| BXD05 | 0.766 | -0.603 |
| BXD06 | 0.774 | -0.249 |
| BXD07 | 0.66 | -0.12 |
| BXD08 | 0.353 | -0.435 |
| BXD09 | 0.443 | -0.237 |
| CAST | 0.739 | -0.135 |
| CCcont | -0.587 | -0.306 |
| DS01 | 0.0 | -0.484 |
| DS02 | 0.057 | 0.065 |
| DS04 | 0.586 | 0.401 |
| DS0c | 0.251 | -0.171 |
| GP01 | -3.176 | -1.34 |
| GP02 | -1.929 | -0.482 |
| GP0c | -3.762 | -2.212 |
| NOD | 1.593 | 0.421 |
| NZO | -0.27 | 0.354 |
| PWK | 0.043 | -0.476 |
| H37Rv_KO_CtpC | -1.923 | -0.71 |
| H37Rv_KO_CtpD | 0.579 | -0.449 |
| H37Rv_KO_Rv1272 | 0.946 | -0.194 |
| H37Rv_KO_SugABC | -0.053 | -0.958 |
| H37Rv_KO_MbtN | -2.132 | -0.493 |
| Trans05 | 0.629 | -0.186 |
| macrophage_unactivated | -1.326 | -0.142 |
| IL1 | 0.742 | -0.11 |
| Rapamycin | -0.175 | -0.353 |
| Tcell | 0.502 | -0.147 |
| GMCSF | -0.422 | -0.079 |
| IFNab | -1.956 | 0.067 |
| IFNg | -0.521 | 0.393 |
| IFNg_GMCSF1 | -0.666 | 0.27 |
| Rv1432_day32 | 0.314 | 0.053 |
| Rv1565c_day32 | -0.245 | -0.104 |
| secA2_input | 0.618 | -0.631 |
| delta_Rv3594 | 0.477 | 0.069 |
| delta_Rv3717 | -0.458 | -0.571 |
| delta_Rv3811 | 0.269 | 0.116 |
| delta_Rv0954 | 0.249 | 0.058 |
| PonA1 | 0.407 | 0.81 |
| EccD1_KO | 0.599 | -0.543 |
| EspI_KO | 0.519 | 0.0 |
| PE35_KO | 0.318 | 0.499 |
| PPE68_KO | 0.202 | 0.547 |
| glycerol2 | 0.207 | -0.289 |
| lignocerate | 0.81 | -0.259 |
| oleate | -0.362 | 0.25 |
| phosphatidylcholine | 0.861 | -0.123 |
| acetate | -0.18 | -0.233 |
| glucAc | 0.439 | -0.734 |
| Rv0950ko | -0.443 | -0.383 |
| Rv1096ko | -0.98 | -1.583 |
| Rv3684ko | -1.461 | -0.062 |
| delta_otsA_trehalose | -0.364 | 0.019 |