Top 10 genes with highest correlation to Rv2293c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2955c/- | (cc=0.5756) | info on Rv2955c/- |
| Rv2270/lppN | (cc=0.5625) | info on Rv2270/lppN |
| Rv2083/- | (cc=0.5315) | info on Rv2083/- |
| Rv2021c/- | (cc=0.5227) | info on Rv2021c/- |
| Rv2435c/- | (cc=0.5029) | info on Rv2435c/- |
| Rv1869c/- | (cc=0.482) | info on Rv1869c/- |
| Rv1115/- | (cc=0.4722) | info on Rv1115/- |
| Rv2570/- | (cc=0.4634) | info on Rv2570/- |
| Rv3111/moaC1 | (cc=0.4626) | info on Rv3111/moaC1 |
| Rv0865/mog | (cc=0.4551) | info on Rv0865/mog |
Correlation of Rv2293c/- with Rv2270/lppN
Normalized LFCs for Rv2293c/-:
(description and provenance of datasets)
| Rv2293c/- | Rv2270/lppN | |
| Fe_supp_jason_reseq | -0.297 | 0.71 |
| low_pH_jason_reseq | 0.828 | -0.323 |
| NO_jason_reseq | -0.425 | -0.318 |
| B6_jason_reseq | -1.388 | 0.63 |
| MHCII_jason_reseq | -0.586 | -0.077 |
| Isoniazid02 | -0.06 | -0.26 |
| Rifampicin4 | 1.097 | 0.401 |
| Ethambutol3 | 0.187 | -0.185 |
| Meropenem3 | 2.283 | 0.398 |
| Vancomycin16 | 0.735 | 0.096 |
| Rv2680_day32 | 0.169 | 0.184 |
| H37Rv_KO_MarP | 0.979 | 0.459 |
| hypoxia_3wks | 0.255 | -0.315 |
| hypoxia_6wks | 0.067 | -0.031 |
| glycerol | -0.582 | 0.553 |
| cholesterol | -0.302 | -0.164 |
| AJ | 0.237 | -0.629 |
| Bibs02 | 0.356 | -1.25 |
| Bibs02c | 0.956 | 0.638 |
| BL6 | -1.649 | -1.299 |
| BL6a | 0.098 | -0.033 |
| BXD01 | 0.147 | -0.933 |
| BXD010 | -0.297 | 0.595 |
| BXD011 | 0.031 | 0.081 |
| BXD03 | -0.191 | -1.289 |
| BXD04 | -0.366 | -0.581 |
| BXD05 | 0.082 | 0.086 |
| BXD06 | -0.227 | -0.435 |
| BXD07 | -0.247 | -0.222 |
| BXD08 | -0.34 | -0.931 |
| BXD09 | -0.169 | -0.184 |
| CAST | -0.073 | -0.324 |
| CCcont | -2.002 | -1.924 |
| DS01 | -0.284 | -0.058 |
| DS02 | -0.737 | -0.246 |
| DS04 | -0.274 | -0.505 |
| DS0c | -0.572 | -0.284 |
| GP01 | 0.455 | -0.614 |
| GP02 | -0.679 | -0.102 |
| GP0c | 0.14 | -0.734 |
| NOD | 1.404 | 0.805 |
| NZO | -0.171 | -0.964 |
| PWK | 0.502 | 0.033 |
| H37Rv_KO_CtpC | 0.099 | 0.104 |
| H37Rv_KO_CtpD | 0.443 | -0.251 |
| H37Rv_KO_Rv1272 | -0.869 | 0.998 |
| H37Rv_KO_SugABC | 0.14 | 0.159 |
| H37Rv_KO_MbtN | 0.563 | -0.597 |
| Trans05 | -0.138 | 0.103 |
| macrophage_unactivated | 0.193 | -0.376 |
| IL1 | -1.003 | 0.273 |
| Rapamycin | -1.663 | -0.761 |
| Tcell | 0.039 | -0.124 |
| GMCSF | 0.066 | -0.597 |
| IFNab | -0.233 | -0.057 |
| IFNg | -0.102 | 0.43 |
| IFNg_GMCSF1 | 0.449 | 0.346 |
| Rv1432_day32 | 1.358 | 0.621 |
| Rv1565c_day32 | -1.181 | -1.199 |
| secA2_input | -0.999 | -1.276 |
| delta_Rv3594 | 0.485 | 1.115 |
| delta_Rv3717 | 0.474 | 0.203 |
| delta_Rv3811 | 0.248 | 1.715 |
| delta_Rv0954 | 0.274 | 0.048 |
| PonA1 | -0.075 | -0.235 |
| EccD1_KO | 0.638 | 1.579 |
| EspI_KO | 0.847 | 1.845 |
| PE35_KO | 1.28 | 3.106 |
| PPE68_KO | 1.318 | 3.318 |
| glycerol2 | -0.74 | -1.544 |
| lignocerate | -1.249 | -2.176 |
| oleate | 0.21 | -1.198 |
| phosphatidylcholine | -0.48 | -1.751 |
| acetate | -1.599 | -2.622 |
| glucAc | -2.283 | -2.001 |
| Rv0950ko | -1.288 | 0.464 |
| Rv1096ko | -1.411 | -0.341 |
| Rv3684ko | -1.5 | -0.144 |
| delta_otsA_trehalose | 0.771 | 0.272 |