TnSeqCorr

Top 10 genes with highest correlation to Rv2286c/-:

update plotcorrelationlink to info on gene
Rv1662/pks8 (cc=0.5405) info on Rv1662/pks8
Rv1964/yrbE3A (cc=0.4348) info on Rv1964/yrbE3A
Rv3070/- (cc=0.4133) info on Rv3070/-
Rv1076/lipU (cc=0.4132) info on Rv1076/lipU
Rv0346c/ansP2 (cc=0.4094) info on Rv0346c/ansP2
Rv2767c/- (cc=0.4075) info on Rv2767c/-
Rv1557/mmpL6 (cc=0.4048) info on Rv1557/mmpL6
Rv1980c/mpt64 (cc=0.4005) info on Rv1980c/mpt64
Rv2558/- (cc=0.3882) info on Rv2558/-
Rv2231c/cobC (cc=0.3881) info on Rv2231c/cobC

Correlation of Rv2286c/- with Rv0346c/ansP2

Normalized LFCs for Rv2286c/-:
(description and provenance of datasets)
Rv2286c/-Rv0346c/ansP2
Fe_supp_jason_reseq

-0.799

-2.144

low_pH_jason_reseq

-0.052

-1.241

NO_jason_reseq

-0.081

-1.045

B6_jason_reseq

-0.688

-1.311

MHCII_jason_reseq

-0.484

-1.572

Isoniazid02

-0.054

-1.132

Rifampicin4

-1.007

1.335

Ethambutol3

-0.584

1.181

Meropenem3

-0.435

0.052

Vancomycin16

-0.138

-0.093

Rv2680_day32

0.898

0.412

H37Rv_KO_MarP

-0.246

-0.648

hypoxia_3wks

0.096

-0.614

hypoxia_6wks

0.198

1.662

glycerol

-0.908

-5.051

cholesterol

-1.314

-4.096

AJ

0.382

-0.45

Bibs02

1.003

-0.146

Bibs02c

-0.182

-0.627

BL6

1.322

-0.755

BL6a

0.234

-0.418

BXD01

-0.07

-0.141

BXD010

0.431

0.227

BXD011

0.243

0.113

BXD03

0.326

0.421

BXD04

0.063

0.37

BXD05

0.042

0.525

BXD06

0.17

0.545

BXD07

0.558

0.025

BXD08

0.013

-0.307

BXD09

0.699

-0.119

CAST

-0.307

0.195

CCcont

0.219

-0.805

DS01

-0.287

-0.438

DS02

-0.397

-0.939

DS04

-0.61

0.818

DS0c

0.432

-0.677

GP01

1.435

-0.042

GP02

-0.52

-0.829

GP0c

0.092

-0.486

NOD

0.023

-0.368

NZO

0.432

-0.019

PWK

1.304

1.262

H37Rv_KO_CtpC

1.458

-0.565

H37Rv_KO_CtpD

1.137

-0.267

H37Rv_KO_Rv1272

0.954

-0.8

H37Rv_KO_SugABC

-1.775

-0.993

H37Rv_KO_MbtN

0.657

0.546

Trans05

1.095

-0.228

macrophage_unactivated

0.672

-0.221

IL1

0.519

0.095

Rapamycin

0.654

-0.071

Tcell

0.57

0.951

GMCSF

0.251

0.639

IFNab

0.227

-0.541

IFNg

0.086

0.337

IFNg_GMCSF1

1.2

0.537

Rv1432_day32

0.327

1.107

Rv1565c_day32

-0.493

-1.156

secA2_input

0.186

-0.54

delta_Rv3594

0.959

0.809

delta_Rv3717

0.174

0.938

delta_Rv3811

1.038

0.828

delta_Rv0954

1.001

0.061

PonA1

0.613

0.381

EccD1_KO

0.431

-0.187

EspI_KO

0.399

-0.374

PE35_KO

-0.117

-1.059

PPE68_KO

0.243

-0.723

glycerol2

0.311

1.225

lignocerate

-0.017

-0.153

oleate

0.465

2.562

phosphatidylcholine

0.311

0.0

acetate

0.224

0.369

glucAc

1.153

0.685

Rv0950ko

-0.739

0.353

Rv1096ko

0.884

0.437

Rv3684ko

-0.18

0.242

delta_otsA_trehalose

0.648

0.449