Top 10 genes with highest correlation to Rv2282c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1541c/lprI | (cc=0.5791) | info on Rv1541c/lprI |
| Rv1052/- | (cc=0.5667) | info on Rv1052/- |
| Rv0914c/- | (cc=0.5661) | info on Rv0914c/- |
| Rv1708/- | (cc=0.5444) | info on Rv1708/- |
| Rv1291c/- | (cc=0.5432) | info on Rv1291c/- |
| Rv2515c/- | (cc=0.5427) | info on Rv2515c/- |
| Rv1182/papA3 | (cc=0.5419) | info on Rv1182/papA3 |
| Rv1514c/- | (cc=0.5402) | info on Rv1514c/- |
| Rv1250/- | (cc=0.5371) | info on Rv1250/- |
| Rv1251c/- | (cc=0.5223) | info on Rv1251c/- |
Correlation of Rv2282c/- with Rv1250/-
Normalized LFCs for Rv2282c/-:
(description and provenance of datasets)
| Rv2282c/- | Rv1250/- | |
| Fe_supp_jason_reseq | -0.358 | -0.278 |
| low_pH_jason_reseq | -0.102 | 0.244 |
| NO_jason_reseq | 0.515 | -0.462 |
| B6_jason_reseq | 2.098 | 0.485 |
| MHCII_jason_reseq | 1.597 | 0.332 |
| Isoniazid02 | 0.629 | -0.755 |
| Rifampicin4 | 0.834 | -0.065 |
| Ethambutol3 | 0.375 | -0.411 |
| Meropenem3 | 0.132 | 0.649 |
| Vancomycin16 | 0.669 | -0.218 |
| Rv2680_day32 | -0.683 | 0.846 |
| H37Rv_KO_MarP | -0.364 | 0.23 |
| hypoxia_3wks | 0.482 | 0.084 |
| hypoxia_6wks | 0.253 | -0.044 |
| glycerol | -1.336 | -0.19 |
| cholesterol | -0.545 | 0.035 |
| AJ | -0.632 | 0.109 |
| Bibs02 | -0.233 | 0.086 |
| Bibs02c | 0.0 | 0.17 |
| BL6 | -1.812 | -0.862 |
| BL6a | -0.839 | -0.307 |
| BXD01 | -0.686 | -0.517 |
| BXD010 | -1.313 | -1.023 |
| BXD011 | -0.603 | -0.358 |
| BXD03 | -1.237 | -0.783 |
| BXD04 | -1.268 | -0.57 |
| BXD05 | -0.661 | -0.658 |
| BXD06 | -1.121 | -0.554 |
| BXD07 | -0.888 | -0.625 |
| BXD08 | -0.17 | -0.117 |
| BXD09 | -1.249 | -0.621 |
| CAST | 1.074 | -0.202 |
| CCcont | -1.715 | -0.744 |
| DS01 | 0.467 | 0.243 |
| DS02 | -0.072 | 0.703 |
| DS04 | 1.373 | 0.273 |
| DS0c | -0.357 | 0.372 |
| GP01 | -0.673 | 0.117 |
| GP02 | -1.614 | -0.644 |
| GP0c | -1.493 | -0.753 |
| NOD | 0.711 | 0.207 |
| NZO | -0.718 | 0.094 |
| PWK | 0.021 | -0.134 |
| H37Rv_KO_CtpC | -0.353 | -0.049 |
| H37Rv_KO_CtpD | -1.414 | -1.284 |
| H37Rv_KO_Rv1272 | 0.329 | -0.238 |
| H37Rv_KO_SugABC | -1.574 | 0.32 |
| H37Rv_KO_MbtN | -1.999 | -0.125 |
| Trans05 | -0.811 | -0.23 |
| macrophage_unactivated | -0.35 | -0.398 |
| IL1 | -0.593 | -0.338 |
| Rapamycin | -2.179 | -0.387 |
| Tcell | -0.176 | -0.815 |
| GMCSF | 0.647 | -0.364 |
| IFNab | -0.795 | -0.1 |
| IFNg | -0.374 | -0.059 |
| IFNg_GMCSF1 | -0.258 | 0.236 |
| Rv1432_day32 | -0.164 | -0.245 |
| Rv1565c_day32 | 0.924 | 0.85 |
| secA2_input | -2.677 | 0.149 |
| delta_Rv3594 | 0.205 | -0.358 |
| delta_Rv3717 | -0.287 | -0.625 |
| delta_Rv3811 | -0.164 | -0.457 |
| delta_Rv0954 | -0.349 | -0.359 |
| PonA1 | 0.192 | -0.16 |
| EccD1_KO | 0.595 | 0.704 |
| EspI_KO | 0.973 | 0.97 |
| PE35_KO | 2.395 | 0.811 |
| PPE68_KO | 2.265 | 0.809 |
| glycerol2 | -0.731 | -0.343 |
| lignocerate | -0.13 | 0.157 |
| oleate | -0.074 | -0.098 |
| phosphatidylcholine | -0.354 | 0.167 |
| acetate | 0.394 | -0.216 |
| glucAc | 0.103 | -0.24 |
| Rv0950ko | -1.188 | -0.492 |
| Rv1096ko | 0.856 | 0.311 |
| Rv3684ko | 0.298 | -0.118 |
| delta_otsA_trehalose | -1.239 | -0.602 |